RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SCAMP4Q969E2 229 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SGF29Q96ES7 293 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 GATA5Q9BWX5 397 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CLPBQ9H078 707 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ABCG8Q9H221 673 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 STN1Q9H668 368 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ASB8Q9H765 288 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ZNF395Q9H8N7 513 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 GPR27Q9NS67 375 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 GNPTGQ9UJJ9 305 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PLXNB3Q9ULL4 1909 aa14.32□□□□□ -0.12
TNFRSF1A-204ENST00000440083 H3BMM5 538 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PSMD11O00231 422 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PRMT5O14744 637 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 DLX3O60479 287 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 FOXD2O60548 495 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SNUPNO95149 360 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 WISP3O95389 354 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ZNF30P17039 623 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 BPIP17213 487 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SERPINB5P36952 375 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RABIFP47224 123 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 HK2P52789 917 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 AQP5P55064 265 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 DNAJB13P59910 316 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ATP6V0D1P61421 351 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 FZD2Q14332 565 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ZNF423Q2M1K9 1284 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 GPR33Q49SQ1 333 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PTRHD1Q6GMV3 140 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RAB44Q7Z6P3 723 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SERPINA9Q86WD7 417 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 AFAP1L2Q8N4X5 818 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NKAPQ8N5F7 415 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 FITM2Q8N6M3 262 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NETO1Q8TDF5 533 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ANKRD49Q8WVL7 239 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 UBXN10Q96LJ8 280 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ZDHHC5Q9C0B5 715 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ALG9Q9H6U8 611 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 TXLNGQ9NUQ3 528 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 HEY2Q9UBP5 337 aa14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PNMA8BQ9ULN7 279 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-204ENST00000440083 TARM1B6A8C7 271 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SCAMP1O15126 338 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NPHS1O60500 1241 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CER1O95813 267 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SOD1P00441 154 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SBK3P0C264 359 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CD1DP15813 335 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RPS3P23396 243 aaKnown RBP eCLIP14.3□□□□□ -0.123e-7■■■□□ 18.4
TNFRSF1A-204ENST00000440083 SCTRP47872 440 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SPINT3P49223 89 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ADARP55265 1226 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PRKAA1Q13131 559 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 EIF2B5Q13144 721 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NFATC2Q13469 925 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RAET1GQ6H3X3 334 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 IL27RAQ6UWB1 636 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 PIWIL4Q7Z3Z4 852 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CCNYL1Q8N7R7 359 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 EXT2Q93063 718 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SKA1Q96BD8 255 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 FAM136AQ96C01 138 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ULK4Q96C45 1275 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RILPQ96NA2 401 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SORT1Q99523 831 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ELF4Q99607 663 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 GPR21Q99679 349 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 APOOQ9BUR5 198 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RIOK2Q9BVS4 552 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 LGR4Q9BXB1 951 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 C20orf27Q9GZN8 174 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 DRC3Q9H069 523 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ILKAPQ9H0C8 392 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 TCEAL2Q9H3H9 227 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 RAD18Q9NS91 495 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 DNAAF2Q9NVR5 837 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NCKIPSDQ9NZQ3 722 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 KLF15Q9UIH9 416 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SLC12A4Q9UP95 1085 aa14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 OAS3Q9Y6K5 1087 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-204ENST00000440083 TDRD6O60522 2096 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 A0A1B0GTQ1 180 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 A8MT66 165 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 H0YHG0 523 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 OR1I1O60431 355 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 SDC3O75056 442 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 NIPSNAP2O75323 286 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ATP5HO75947 161 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CHRM3P20309 590 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 CD9P21926 228 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 ACRV1P26436 265 aa14.29□□□□□ -0.12
TNFRSF1A-204ENST00000440083 LIMK1P53667 647 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms