RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 FAM13CQ8NE31 585 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 GSTCDQ8NEC7 633 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 LMX1AQ8TE12 382 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 TNFAIP8L1Q8WVP5 186 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 PIK3R3Q92569 461 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 NUS1Q96E22 293 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 MFHAS1Q9Y4C4 1052 aa13.6□□□□□ -0.23
LRCH3-206ENST00000438796 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 NME6O75414 186 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 GATBO75879 557 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SEMA3DO95025 777 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 TNFP01375 233 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PTNP21246 168 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 AGXTP21549 392 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 AHSA2Q719I0 299 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 MNTQ99583 582 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CENPMQ9NSP4 180 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 RBMX2Q9Y388 322 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CPNE3O75131 537 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 FSHRP23945 695 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ECHS1P30084 290 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 GPR68Q15743 365 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SPDYCQ5MJ68 293 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 TMEM164Q5U3C3 297 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 METTL27Q8N6F8 245 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 MTERF1Q99551 399 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PCYOX1Q9UHG3 505 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PMF1-BGLAPU3KQ54 211 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PTPRMP28827 1452 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 MICAL3Q7RTP6 2002 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 C5orf60A6NFR6 353 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 S100A6P06703 90 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CDH4P55283 916 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 C11orf65Q8NCR3 313 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PIWIL1Q96J94 861 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CIB1Q99828 191 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 WASF2Q9Y6W5 498 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 OR1I1O60431 355 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 NDST3O95803 873 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CD48P09326 243 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ZNF16P17020 682 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ITGB5P18084 799 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CBLP22681 906 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 KLF1Q13351 362 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 VSTM1Q6UX27 236 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 TMEM145Q8NBT3 493 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PLAGL1Q9UM63 463 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 C9J4A7 227 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ZNF20P17024 532 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ASMTP46597 345 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 AP1S2P56377 157 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 DNASE1L3Q13609 305 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 GRM2Q14416 872 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ART4Q93070 314 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SLC35G5Q96KT7 338 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PDZD7Q9H5P4 517 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SMURF1Q9HCE7 757 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 FKBPLQ9UIM3 349 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 IRGMA1A4Y4 181 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 NR0B1P51843 470 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 RPP38P78345 283 aaKnown RBP13.59□□□□□ -0.23
LRCH3-206ENST00000438796 ODF4Q2M2E3 257 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CLEC12AQ5QGZ9 265 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 IDNKQ5T6J7 187 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 PYHIN1Q6K0P9 492 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CPNE9Q8IYJ1 553 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 KXD1Q9BQD3 176 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 C12orf4Q9NQ89 552 aa13.59□□□□□ -0.23
LRCH3-206ENST00000438796 TSPAN1O60635 241 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.23
LRCH3-206ENST00000438796 LMO2P25791 158 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 ABCA11PQ4W5N1 156 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 SPIN3Q5JUX0 258 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 FKBP1CQ5VVH2 108 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 DIRAS2Q96HU8 199 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 MAGEL2Q9UJ55 1249 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.23
LRCH3-206ENST00000438796 FKBP7Q9Y680 259 aa13.58□□□□□ -0.23
LRCH3-206ENST00000438796 FAM149AA5PLN7 773 aa13.58□□□□□ -0.24
LRCH3-206ENST00000438796 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
LRCH3-206ENST00000438796 OR4F21O95013 312 aa13.58□□□□□ -0.24
LRCH3-206ENST00000438796 SPATC1Q76KD6 591 aa13.58□□□□□ -0.24
LRCH3-206ENST00000438796 MCFD2Q8NI22 146 aa13.58□□□□□ -0.24
LRCH3-206ENST00000438796 CLK4Q9HAZ1 481 aaKnown RBP13.58□□□□□ -0.24
LRCH3-206ENST00000438796 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
LRCH3-206ENST00000438796 RSL24D1Q9UHA3 163 aaKnown RBP13.58□□□□□ -0.24
LRCH3-206ENST00000438796 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms