RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ZBED3Q96IU2 234 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PHACTR3Q96KR7 559 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PANX2Q96RD6 677 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 EGFL8Q99944 293 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PIGQQ9BRB3 760 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 OSBPL10Q9BXB5 764 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 EGLN1Q9GZT9 426 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLPBQ9H078 707 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 C11orf54Q9H0W9 315 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RHBGQ9H310 441 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 EPHX3Q9H6B9 360 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PSTPIP2Q9H939 334 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CNOT10Q9H9A5 744 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 LY9Q9HBG7 655 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 NUDT15Q9NV35 164 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ETNK2Q9NVF9 386 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM120CQ9NX05 1096 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ABI3Q9P2A4 366 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 THEGQ9P2T0 379 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 HEY2Q9UBP5 337 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 DDX25Q9UHL0 483 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 VPS4AQ9UN37 437 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRELID1Q9Y255 219 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 WBP11Q9Y2W2 641 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 MFHAS1Q9Y4C4 1052 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PCDHB7Q9Y5E2 793 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIAA1217Q5T5P2 1943 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 A0A1W2PRG0 241 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF785A8K8V0 405 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 DIRC3C9JPN6 131 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SPECC1L-ADORA2AF8WAN1 911 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 M0QYG6 137 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TLR4O00206 839 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 WRBO00258 174 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 OGTO15294 1046 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CHADO15335 359 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SSX5O60225 188 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBX19O60806 448 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 B4GALT2O60909 372 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC43A1O75387 559 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CBR3O75828 277 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 RHOBTB1O94844 696 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 GLAP06280 429 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CRYGCP07315 174 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 FHP07954 510 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 PEPDP12955 493 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 LYL1P12980 280 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 MMP9P14780 707 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 NR1D1P20393 614 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDC25AP30304 524 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 NTSR1P30989 418 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TIA1P31483 386 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC6A4P31645 630 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 PCGF2P35227 344 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 VIPR2P41587 438 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SERPINH1P50454 418 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 DGKEP52429 567 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SUCLG1P53597 346 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 F2RL1P55085 397 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SRP54P61011 504 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TPM4P67936 248 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TUBA1BP68363 451 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SRSF4Q08170 494 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 FOXF2Q12947 444 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 PDE7AQ13946 482 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 GNA13Q14344 377 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 NCAPD2Q15021 1401 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 WDR43Q15061 677 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 NCF4Q15080 339 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 KRT31Q15323 416 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZRSR1Q15695 479 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CHRNA6Q15825 494 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SNAPC1Q16533 368 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 DECR1Q16698 335 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZSCAN23Q3MJ62 389 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZIK1Q3SY52 487 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC36A3Q495N2 470 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 FBXO43Q4G163 708 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPAT3Q53EU6 434 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SMUG1Q53HV7 270 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 SGO1Q5FBB7 561 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 DCST1Q5T197 706 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 PMS2CLQ68D20 193 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 NAPEPLDQ6IQ20 393 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 EFCAB12Q6NXP0 572 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TSSK4Q6SA08 328 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 RANBP10Q6VN20 620 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM182Q6ZP80 229 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 TUBA1AQ71U36 451 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 EFL1Q7Z2Z2 1120 aaKnown RBP3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRSS42Q7Z5A4 293 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 RASAL3Q86YV0 1011 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZDHHC17Q8IUH5 632 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 GRAMD2AQ8IUY3 354 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZDHHC21Q8IVQ6 265 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 Q8NA96 180 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLEC1AQ8NC01 280 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 MCUQ8NE86 351 aa3.57□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM46DQ8NEK8 389 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms