RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TFDP3Q5H9I0 405 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 SIRPB2Q5JXA9 342 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 COLEC12Q5KU26 742 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 GPRC6AQ5T6X5 926 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 TCTN3Q6NUS6 607 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ZNF449Q6P9G9 518 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 FIGNL1Q6PIW4 674 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 TMEM220Q6QAJ8 160 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 MFSD7Q6UXD7 560 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 DET1Q7L5Y6 550 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 PID1Q7Z2X4 250 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ZC3H18Q86VM9 953 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 KMT5CQ86Y97 462 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CNGA4Q8IV77 575 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ZNF547Q8IVP9 402 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 DDHD1Q8NEL9 900 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 OR8K5Q8NH50 307 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CT55Q8WUE5 264 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 KLHL6Q8WZ60 621 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 HAUS1Q96CS2 278 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 RBM41Q96IZ5 413 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 FCRL4Q96PJ5 515 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 QKIQ96PU8 341 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS50-204ENST00000438395 GPR87Q9BY21 358 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ACTL8Q9H568 366 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 NHEJ1Q9H9Q4 299 aaPredicted RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 FGF21Q9NSA1 209 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ABHD10Q9NUJ1 306 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ANKMY1Q9P2S6 941 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 SAE1Q9UBE0 346 aaPredicted RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 TRHDEQ9UKU6 1024 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 INTUQ9ULD6 942 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 HYOU1Q9Y4L1 999 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 HEBP2Q9Y5Z4 205 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 COLEC10Q9Y6Z7 277 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 COL12A1Q99715 3063 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 OR5K3A6NET4 321 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 HACD1B0YJ81 288 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 MATN2O00339 956 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 IFRD1O00458 451 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 AURKAO14965 403 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 BUD23O43709 281 aaKnown RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A9O60656 530 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 VPS4BO75351 444 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 SCRG1O75711 98 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ZRANB2O95218 330 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS50-204ENST00000438395 IPO7O95373 1038 aaKnown RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 ZBTB11O95625 1053 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 KLK3P07288 261 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 EBLN1P0CF75 366 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 PECAM1P16284 738 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A6P19224 532 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CDH3P22223 829 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A1P22309 533 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A4P22310 534 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 NDUFS1P28331 727 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CETN2P41208 172 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CHRNA4P43681 627 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CTSCP53634 463 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 GEMP55040 296 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 TUBB4BP68371 445 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 HSD11B2P80365 405 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 TNP2Q05952 138 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 DMPKQ09013 629 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 NFE2L1Q14494 772 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 KCNAB1Q14722 419 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 SPA17Q15506 151 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 SLC1A5Q15758 541 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 PWWP2BQ6NUJ5 590 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 KDELC1Q6UW63 502 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 HOOK3Q86VS8 718 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 VSTM4Q8IW00 320 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ZNF567Q8N184 647 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 CARFQ8N187 725 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 RASGEF1AQ8N9B8 481 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 GPR150Q8NGU9 434 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 DTX3LQ8TDB6 740 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 THAP4Q8WY91 577 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
VPS50-204ENST00000438395 MR1Q95460 341 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 TADA1Q96BN2 335 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ULK4Q96C45 1275 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 SLC41A2Q96JW4 573 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 C12orf66Q96MD2 445 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 PPP1R2P1Q96PQ5 205 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 FCRL5Q96RD9 977 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 FICDQ9BVA6 458 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 SLC7A5P2Q9GIP4 190 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 RAB33BQ9H082 229 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 GBA3Q9H227 469 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 VPS37BQ9H9H4 285 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A7Q9HAW7 530 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A10Q9HAW8 530 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 UGT1A8Q9HAW9 530 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 LHX9Q9NQ69 397 aa7.58□□□□□ -1.2
VPS50-204ENST00000438395 ACSS2Q9NR19 701 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms