RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ANXA7P20073 488 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 UBA1P22314 1058 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SHC1P29353 583 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 TLX1P31314 330 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 ICAM3P32942 547 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 HSPA1LP34931 641 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLC6A12P48065 614 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 TMEM115Q12893 351 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 CSTF3Q12996 717 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 PDE1CQ14123 709 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 XKR6Q5GH73 641 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 DOK6Q6PKX4 331 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 FASTKD5Q7L8L6 764 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 ARHGAP12Q8IWW6 846 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 CNTROBQ8N137 903 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SCML4Q8N228 414 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 FRMD1Q8N878 549 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 UTP15Q8TED0 518 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 PPP4R1Q8TF05 950 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 PSPC1Q8WXF1 523 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 POMGNT1Q8WZA1 660 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SGCDQ92629 289 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 ARHGEF2Q92974 986 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 GTF3C6Q969F1 213 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 CCDC34Q96HJ3 373 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 RHNO1Q9BSD3 238 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 FGFBP2Q9BYJ0 223 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLC28A3Q9HAS3 691 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SCPEP1Q9HB40 452 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 LTB4R2Q9NPC1 389 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZNF71Q9NQZ8 489 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 PCDHB16Q9NRJ7 776 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 ECHDC1Q9NTX5 307 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 NSMCE4AQ9NXX6 385 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 DLGAP2Q9P1A6 1054 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SWAP70Q9UH65 585 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 CSAG2Q9Y5P2 127 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 NCOA1Q15788 1441 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 NEURL4Q96JN8 1562 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 FSD2A1L4K1 749 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 A8MU10 97 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SNAP23O00161 211 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SCAMP1O15126 338 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 TRMUO75648 421 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZFAND5O76080 213 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 NADKO95544 446 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 TRIM49P0CI25 452 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 TRIM49CP0CI26 452 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 NFKBIAP25963 317 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 TM4SF1P30408 202 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 PSMB10P40306 273 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 WNT5AP41221 380 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 CCR10P46092 362 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 PRAMEP78395 509 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 NIPAL4Q0D2K0 466 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 FGFBP1Q14512 234 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 DUOXA1Q1HG43 343 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 TMEM154Q6P9G4 183 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 Q75L30 129 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ISCA2Q86U28 154 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ERC1Q8IUD2 1116 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 LMNTD2Q8IXW0 634 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 GBGT1Q8N5D6 347 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SCFD2Q8WU76 684 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 USP6NLQ92738 828 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 RRNAD1Q96FB5 475 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 PKP2Q99959 881 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ITPAQ9BY32 194 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SYNCQ9H7C4 482 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 EIF2B3Q9NR50 452 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLC6A13Q9NSD5 602 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 PTTG2Q9NZH5 202 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ABI3Q9P2A4 366 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 STK39Q9UEW8 545 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 ASIC3Q9UHC3 531 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 CAPN7Q9Y6W3 813 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 KIF27Q86VH2 1401 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 FANCAO15360 1455 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 NUP153P49790 1475 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 NEO1Q92859 1461 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 CDK13Q14004 1512 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 SAMD9Q5K651 1589 aa2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 CLTCQ00610 1675 aaKnown RBP2.81□□□□□ -1.96
HMGB1P31-201ENST00000437242 KAT6BQ8WYB5 2073 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 POLR1AO95602 1720 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 EFCAB5A4FU69 1503 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 DENND4BO75064 1496 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 PTPRTO14522 1441 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 FHOD3Q2V2M9 1422 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 AKNAQ7Z591 1439 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 A0A087WW49 117 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 A0A1W2PQF6 199 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 K7ENM7 598 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 PTP4A3O75365 173 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 SEC31AO94979 1220 aaKnown RBP2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MOCS3O95396 460 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 MLYCDO95822 493 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 EDN1P05305 212 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 LIPFP07098 398 aa2.8□□□□□ -1.96
HMGB1P31-201ENST00000437242 ALOX12P18054 663 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms