RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HEBP2Q9Y5Z4 205 aa17.94■□□□□ 0.46
HLA-F-220ENST00000434407 CFAP20Q9Y6A4 193 aaKnown RBP17.94■□□□□ 0.46
HLA-F-220ENST00000434407 CCDC187A0A096LP49 1063 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 IGHV5-10-1A0A0J9YXX1 117 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 IQCF5A8MTL0 148 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 BHMG1C9JSJ3 638 aaPredicted RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 PFDN6O15212 129 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 GPC4O75487 556 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 DXOO77932 396 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 UBXN7O94888 489 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 THRAP10827 490 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 AOAHP28039 575 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 ACADLP28330 430 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 NDUFS1P28331 727 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 ELK3P41970 407 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 PREPP48147 710 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 EIF3IQ13347 325 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 TRA2AQ13595 282 aaKnown RBP eCLIP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 THOC5Q13769 683 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 FRG1Q14331 258 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 SPANXN3Q5MJ09 141 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 CTSL3PQ5NE16 218 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 ZNF470Q6ECI4 717 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 ZNF449Q6P9G9 518 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 PDZD3Q86UT5 571 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 WDR36Q8NI36 951 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 KIF18AQ8NI77 898 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 CALML6Q8TD86 181 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 AHCYL2Q96HN2 611 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 TSSK1BQ9BXA7 367 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 STRADBQ9C0K7 418 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 KIR3DX1Q9H7L2 352 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 POLR1BQ9H9Y6 1135 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 C20orf96Q9NUD7 363 aaPredicted RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 IMP3Q9NV31 184 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 TMEM9Q9P0T7 183 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 CDYLQ9Y232 598 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 VPS9D1Q9Y2B5 631 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 UTP11Q9Y3A2 253 aaKnown RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 PCDHGA8Q9Y5G5 932 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 MN1Q10571 1320 aaPredicted RBP17.93■□□□□ 0.46
HLA-F-220ENST00000434407 LAMA5O15230 3695 aa17.93■□□□□ 0.46
HLA-F-220ENST00000434407 ESR1P03372 595 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 CYP4F3Q08477 520 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 ZNF789Q5FWF6 425 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 DUS1LQ6P1R4 473 aaKnown RBP17.92■□□□□ 0.46
HLA-F-220ENST00000434407 KCNMB4Q86W47 210 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 DENND6AQ8IWF6 608 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 CNTN4Q8IWV2 1026 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 UNC5BQ8IZJ1 945 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 MMGT1Q8N4V1 131 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 SEC14L1Q92503 715 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 TMEM159Q96B96 161 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 PANX3Q96QZ0 392 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 RAB33BQ9H082 229 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 RAB17Q9H0T7 212 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 DPH5Q9H2P9 285 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 CCDC86Q9H6F5 360 aaKnown RBP17.92■□□□□ 0.46
HLA-F-220ENST00000434407 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 EPHA6Q9UF33 1036 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 SLC24A2Q9UI40 661 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 SATB2Q9UPW6 733 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 COLEC10Q9Y6Z7 277 aa17.92■□□□□ 0.46
HLA-F-220ENST00000434407 UBA6A0AVT1 1052 aaPredicted RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 H3BMM5 538 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 IFRD1O00458 451 aaPredicted RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 HGSO14964 777 aaPredicted RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 SLCO2B1O94956 709 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 C9P02748 559 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 MPOP05164 745 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 SLC1A2P43004 574 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 CAPZBP47756 277 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 EIF3BP55884 814 aaKnown RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 GABREP78334 506 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 CALCOCO2Q13137 446 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 CTBP1Q13363 440 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 PTRHD1Q6GMV3 140 aaKnown RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 NAPRTQ6XQN6 538 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 UNC5AQ6ZN44 842 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 ARHGAP22Q7Z5H3 698 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 SLC22A15Q8IZD6 547 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 KRT222Q8N1A0 295 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 MDM1Q8TC05 714 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 NCSTNQ92542 709 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 TFGQ92734 400 aaPredicted RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 ART4Q93070 314 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 CCDC74BQ96LY2 380 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 FAM167BQ9BTA0 163 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 MVB12BQ9H7P6 319 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 ZC3H7BQ9UGR2 993 aaKnown RBP17.91■□□□□ 0.46
HLA-F-220ENST00000434407 FBXO5Q9UKT4 447 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 CHMP2BQ9UQN3 213 aa17.91■□□□□ 0.46
HLA-F-220ENST00000434407 ZFHX4Q86UP3 3567 aa17.9■□□□□ 0.46
HLA-F-220ENST00000434407 PLD2O14939 933 aa17.9■□□□□ 0.46
HLA-F-220ENST00000434407 EIF3HO15372 352 aaKnown RBP eCLIP17.9■□□□□ 0.46
HLA-F-220ENST00000434407 BRINP1O60477 761 aa17.9■□□□□ 0.46
HLA-F-220ENST00000434407 TYRP1P17643 537 aa17.9■□□□□ 0.46
HLA-F-220ENST00000434407 ITGB6P18564 788 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms