RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 POMGNT2Q8NAT1 580 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 AGBL5Q8NDL9 886 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 AENQ8WTP8 325 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CASKIN2Q8WXE0 1202 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MTBPQ96DY7 904 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C16orf58Q96GQ5 468 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NGLY1Q96IV0 654 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FER1L6-AS2Q96M78 137 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SERPINI1Q99574 410 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DPYSL5Q9BPU6 564 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF251Q9BRH9 671 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 BTBD10Q9BSF8 475 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GAL3ST2Q9H3Q3 398 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TRABDQ9H4I3 376 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ARHGEF3Q9NR81 526 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C5AR2Q9P296 337 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CDH7Q9ULB5 785 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MFHAS1Q9Y4C4 1052 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SYNJ1O43426 1573 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CEP170Q5SW79 1584 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 A0A087X0M5 115 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 A0A1B0GX30 115 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 LRRTM2O43300 516 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CNPP09543 421 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 POU3F2P20265 443 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 MARK3P27448 753 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CRABP1P29762 137 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SHMT2P34897 504 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 HOXA1P49639 335 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 AP2S1P53680 142 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 EIF6P56537 245 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SIM1P81133 766 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CCNYL2Q5T2Q4 361 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 DARS2Q6PI48 645 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 RASSF6Q6ZTQ3 369 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TPGS1Q6ZTW0 290 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 USP50Q70EL3 339 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 DPPA4Q7L190 304 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 LINGO2Q7L985 606 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 ENDOVQ8N8Q3 282 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PNMA1Q8ND90 353 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PHOSPHO2Q8TCD6 241 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CCDC107Q8WV48 283 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 AUTS2Q8WXX7 1259 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 GLG1Q92896 1179 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SNAPC3Q92966 411 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 MRPL48Q96GC5 212 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TRAF4Q9BUZ4 470 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SUCNR1Q9BXA5 334 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC2A11Q9BYW1 496 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 POLR1EQ9GZS1 481 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 ING2Q9H160 280 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 DCLRE1BQ9H816 532 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 DECR2Q9NUI1 292 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 MS4A12Q9NXJ0 267 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PKD2L1Q9P0L9 805 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PPP4R1LQ9P1A2 415 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PPP1R3CQ9UQK1 317 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 MAP4K5Q9Y4K4 846 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CBX4O00257 560 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC30A4O14863 429 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC22A1O15245 554 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TGM5O43548 720 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 GPRIN2O60269 458 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TBX10O75333 385 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 UBXN7O94888 489 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CH25HO95992 272 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 GSTA1P08263 222 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PCMT1P22061 227 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 YWHABP31946 246 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 FEN1P39748 380 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 ACTR1BP42025 376 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 HCAR3P49019 387 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 DSG1Q02413 1049 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 ECM1Q16610 540 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 HNRNPA1L2Q32P51 320 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CERKLQ49MI3 558 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC9B1Q4ZJI4 515 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PAN2Q504Q3 1202 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 BSPRYQ5W0U4 402 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 BRINP3Q76B58 766 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CYFIP1Q7L576 1253 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 FGD2Q7Z6J4 655 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TMEM200AQ86VY9 491 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 PHTF2Q8N3S3 785 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TMEM104Q8NE00 496 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 OR10T2Q8NGX3 314 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 AP3S1Q92572 193 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 MARS2Q96GW9 593 aaKnown RBP5.29□□□□□ -1.56
PTPN4-203ENST00000430976 TMED9Q9BVK6 235 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 CD244Q9BZW8 370 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 HDHD2Q9H0R4 259 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 SEMA6AQ9H2E6 1030 aa5.29□□□□□ -1.56
PTPN4-203ENST00000430976 ACTR8Q9H981 624 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms