RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PCDHB1Q9Y5F3 818 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 FAM208BQ5VWN6 2430 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 FANCMQ8IYD8 2048 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 NUP205Q92621 2012 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 MYOCOSA0A1B0GUC4 107 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ILVBLA1L0T0 632 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 H0Y858 1186 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 H7C4K7 107 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PLOD2O00469 737 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 BTN3A1O00481 513 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ACSL4O60488 711 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CBFA2T3O75081 653 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CLDN11O75508 207 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PRSS23O95084 383 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PDGFBP01127 241 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CXCL10P02778 98 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ANXA6P08133 673 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZDHHC11BP0C7U3 371 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 RAP2AP10114 183 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 AVPR2P30518 371 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SLC11A2P49281 568 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ALDH3A2P51648 485 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 OXCT1P55809 520 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 FAM189BP81408 668 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZXDAP98168 799 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CHRNB3Q05901 458 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PWP1Q13610 501 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SPIDRQ14159 915 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 MRPL58Q14197 206 aaKnown RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CAPRIN1Q14444 709 aaKnown RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 IHHQ14623 411 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 TSNQ15631 228 aaKnown RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PTPRNQ16849 979 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF829Q3KNS6 432 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CTXN3Q4LDR2 81 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CYBRD1Q53TN4 286 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PITRM1Q5JRX3 1037 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 C6orf136Q5SQH8 315 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 BROXQ5VW32 411 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 GLYATQ6IB77 296 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF773Q6PK81 442 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CERS6Q6ZMG9 384 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF783Q6ZMS7 281 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SLC24A5Q71RS6 500 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CHST9Q7L1S5 443 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ADAMTSL2Q86TH1 951 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SYVN1Q86TM6 617 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 RIMKLAQ8IXN7 391 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 FAM9CQ8IZT9 166 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SVOPLQ8N434 492 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PDZD8Q8NEN9 1154 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 DNAJB14Q8TBM8 379 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 FNDC8Q8TC99 324 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 OVCA2Q8WZ82 227 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 TMIGD2Q96BF3 282 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 C12orf43Q96C57 262 aaKnown RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 RMDN1Q96DB5 314 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 THAP11Q96EK4 314 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 VPS50Q96JG6 964 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF512Q96ME7 567 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 NSUN5Q96P11 429 aaKnown RBP8.57□□□□□ -1.04
GABPB1-205ENST00000429662 GPR21Q99679 349 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CHID1Q9BWS9 393 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 GORASP2Q9H8Y8 452 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 PREBQ9HCU5 417 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 HPS4Q9NQG7 708 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 TLR9Q9NR96 1032 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 TBC1D23Q9NUY8 699 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 CD274Q9NZQ7 290 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 BLOC1S6Q9UL45 172 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 BTRCQ9Y297 605 aa8.57□□□□□ -1.04
GABPB1-205ENST00000429662 NYNRINQ9P2P1 1898 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 NPEPPSL1A6NEC2 478 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 LOC730098B7Z3J9 87 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 E5RI56 91 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 SLC28A1O00337 649 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 CCL22O00626 93 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 EI24O14681 340 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 STX7O15400 261 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 NBNO60934 754 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 WDR47O94967 919 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 SCELO95171 688 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 CPNE6O95741 557 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 OTCP00480 354 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 C1RP00736 705 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ITGB1P05556 798 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 OR4Q2P0C623 313 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ARSAP15289 507 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF12P17014 697 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 IL1RNP18510 177 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 GGT1P19440 569 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 CR2P20023 1033 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 JAK1P23458 1154 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ACVRL1P37023 503 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 ZFP36L2P47974 494 aaKnown RBP8.56□□□□□ -1.04
GABPB1-205ENST00000429662 DIO3P55073 304 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 GABARAPL2P60520 117 aa8.56□□□□□ -1.04
GABPB1-205ENST00000429662 UFM1P61960 85 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms