RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 KIR2DS5Q14953 304 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 SLMAPQ14BN4 828 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 KBTBD12Q3ZCT8 623 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 PERM1Q5SV97 790 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 CTAGE3PQ8IX95 158 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 CHCHD4Q8N4Q1 142 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 ASZ1Q8WWH4 475 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 NAT6Q93015 286 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 CCDC74AQ96AQ1 378 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 C12orf66Q96MD2 445 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 INSM2Q96T92 566 aaPredicted RBP12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 NDNQ99608 321 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 ZNF624Q9P2J8 865 aaPredicted RBP12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 GALPQ9UBC7 116 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 CPNE7Q9UBL6 633 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 WDFY3Q8IZQ1 3526 aa12.62□□□□□ -0.39
BX088651.4-202ENST00000428895 PRAMEF33A0A0G2JMD5 474 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 FAM159BA6NKW6 160 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 IFRD1O00458 451 aaPredicted RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 KPNA5O15131 536 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 PPM1DO15297 605 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 NUDT21O43809 227 aaKnown RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 VIPP01282 170 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 APOA4P06727 396 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 PROS1P07225 676 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 CDK4P11802 303 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 XRCC1P18887 633 aaPredicted RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 PHBP35232 272 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 RPA4Q13156 261 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 TMED2Q15363 201 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 RPE65Q16518 533 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 CYS1Q717R9 158 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 GALNT7Q86SF2 657 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 SLC9B2Q86UD5 537 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 SLC26A11Q86WA9 606 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 ZNF761Q86XN6 746 aaPredicted RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 Q8N9G6 341 aaPredicted RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 CXorf40BQ96DE9 158 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 RMDN2Q96LZ7 410 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 AARSD1Q9BTE6 412 aaKnown RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 OR52A5Q9H2C5 316 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 STN1Q9H668 368 aaKnown RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 NSMCE4AQ9NXX6 385 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 TXNDC16Q9P2K2 825 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
BX088651.4-202ENST00000428895 CASC3O15234 703 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 GPC4O75487 556 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 RFPL3O75679 317 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 C1QAP02745 245 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 TNFRSF8P28908 595 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 ALDH4A1P30038 563 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 FASLGP48023 281 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 VSNL1P62760 191 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 UBE2IP63279 158 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 EFTUD2Q15029 972 aaKnown RBP eCLIP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 DUS1LQ6P1R4 473 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 VRK3Q8IV63 474 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 PPM1NQ8N819 430 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 SIDT2Q8NBJ9 832 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 UHMK1Q8TAS1 419 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 KCNJ9Q92806 393 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 MRRFQ96E11 262 aaKnown RBP12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 GPR21Q99679 349 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 CDYLQ9Y232 598 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 COMMD10Q9Y6G5 202 aa12.6□□□□□ -0.39
BX088651.4-202ENST00000428895 C1QTNF9BB2RNN3 333 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 VPS26AO75436 327 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 GP1BAP07359 652 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 C1QTNF9P0C862 333 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 MTHFD1P11586 935 aaKnown RBP12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 SAT1P21673 171 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 PPM1FP49593 454 aaPredicted RBP12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 CLCN7P51798 805 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 PMS2P54278 862 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 CDKN2DP55273 166 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 OR1D5P58170 312 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 ILKQ13418 452 aa12.59□□□□□ -0.39
BX088651.4-202ENST00000428895 KRT33BQ14525 404 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms