RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 STK16O75716 305 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 CLPXO76031 633 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 GTF2H2Q13888 395 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 MYBPC3Q14896 1274 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 PDCD4Q53EL6 469 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 GTF2H2CQ6P1K8 395 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 ELAC1Q9H777 363 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TLE6Q9H808 572 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 DNAJC11Q9NVH1 559 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 CLDN9O95484 217 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 GNRH1P01148 92 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 ANXA4P09525 319 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TUSC3Q13454 348 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TIGD6Q17RP2 521 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 SYCE2Q6PIF2 218 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 NEK7Q8TDX7 302 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TSEN15Q8WW01 171 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 EXOSC8Q96B26 276 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TCAF1Q9Y4C2 921 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 NRLP54845 237 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 FAM174BQ3ZCQ3 159 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 LCLAT1Q6UWP7 414 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 XKR5Q6UX68 686 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 LSM14AQ8ND56 463 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 NCKAP1Q9Y2A7 1128 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 CNTNAP1P78357 1384 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 PLIN4Q96Q06 1357 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 OR14I1A6ND48 311 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NEMP2A6NFY4 417 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NOTOA8MTQ0 251 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TLR5O60602 858 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CCNB2O95067 398 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ITGB1P05556 798 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF132P52740 706 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 DEFA5Q01523 94 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TLE2Q04725 743 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SLC22A16Q86VW1 577 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CHST4Q8NCG5 386 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 C11orf65Q8NCR3 313 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SNX33Q8WV41 574 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 MYO19Q96H55 970 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 A0A1W2PQH9 124 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CILPO75339 1184 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CCL5P13501 91 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 HOXB6P17509 224 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 MAPK8P45983 427 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ARHGDIBP52566 201 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ARFIP1P53367 373 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 FRRS1Q6ZNA5 592 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZBTB2Q8N680 514 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ADAMTS15Q8TE58 950 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 PMM1Q92871 262 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CXorf40BQ96DE9 158 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ARHGEF4Q9NR80 690 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TVP23BQ9NYZ1 205 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZW10O43264 779 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 DNTTP04053 509 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 RAP2AP10114 183 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SLC7A1P30825 629 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 DNASE1L3Q13609 305 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SMARCD3Q6STE5 483 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 PRR23CQ6ZRP0 262 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF615Q8N8J6 731 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 OR10G6Q8NH81 332 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 MAFBQ9Y5Q3 323 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TRAV19A0A0A6YYK7 116 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 FFAR2O15552 330 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 GCATO75600 419 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 IL1BP01584 269 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CCND3P30281 292 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 RGS1Q08116 209 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 PTP4A2Q12974 167 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZBED5Q49AG3 693 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ASB18Q6ZVZ8 466 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 MPP5Q8N3R9 675 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF366Q8N895 744 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 C7orf57Q8NEG2 295 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 HAVCR1Q96D42 359 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NSMCE3Q96MG7 304 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 GAS2L1Q99501 681 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 AJAP1Q9UKB5 411 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CNTN6Q9UQ52 1028 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 ADAMDEC1O15204 470 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 GLUD1P00367 558 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 TAS2R39P59534 338 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 CREMQ03060 361 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 NPTX1Q15818 432 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 SMU1Q2TAY7 513 aa14.28□□□□□ -0.12
PTPRU-204ENST00000428026 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
PTPRU-204ENST00000428026 PPP1R16AQ96I34 528 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms