RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SLC24A2Q9UI40 661 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 CHD6Q8TD26 2715 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 ITPR1Q14643 2758 aa20.16■□□□□ 0.82
HSPG2-205ENST00000427897 FAM208BQ5VWN6 2430 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 TK2O00142 265 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 STK17BO94768 372 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 MAP4P27816 1152 aaKnown RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 FOXN2P32314 431 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 SRSF6Q13247 344 aaKnown RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 IL11RAQ14626 422 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 AARS2Q5JTZ9 985 aaKnown RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 MICALCLQ6ZW33 695 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 OTUD6BQ8N6M0 293 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 PHC3Q8NDX5 983 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 OR4E2Q8NGC2 313 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 SNRNP27Q8WVK2 155 aaKnown RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 LCN9Q8WX39 176 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 MAGOHBQ96A72 148 aaKnown RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 RMDN2Q96LZ7 410 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 CD180Q99467 661 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 ULBP3Q9BZM4 244 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 SRMSQ9H3Y6 488 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 PDE7BQ9NP56 450 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 RIMKLBQ9ULI2 386 aa20.15■□□□□ 0.82
HSPG2-205ENST00000427897 TTC7AQ9ULT0 858 aaPredicted RBP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.15■□□□□ 0.82
HSPG2-205ENST00000427897 OR5K3A6NET4 321 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 LIN7AO14910 233 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-205ENST00000427897 MAP3K7O43318 606 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 KIF5CO60282 957 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 PSMA3P25788 255 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 PREPP48147 710 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 CD151P48509 253 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 VPS41P49754 854 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 SH3BP2P78314 561 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 CDK16Q00536 496 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 BOP1Q14137 746 aaKnown RBP20.14■□□□□ 0.81
HSPG2-205ENST00000427897 TRIP13Q15645 432 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-205ENST00000427897 OR13J1Q8NGT2 312 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 KLHL6Q8WZ60 621 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 TFGQ92734 400 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-205ENST00000427897 PEX13Q92968 403 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 ZNF778Q96MU6 729 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 EFHD1Q9BUP0 239 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 IL22Q9GZX6 179 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 CHRAC1Q9NRG0 131 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 CATSPERZQ9NTU4 200 aa20.14■□□□□ 0.81
HSPG2-205ENST00000427897 GSAPA4D1B5 854 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 KRT14P02533 472 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 NELFEP18615 380 aaKnown RBP20.13■□□□□ 0.81
HSPG2-205ENST00000427897 POLR2CP19387 275 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PDHA2P29803 388 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 ARCN1P48444 511 aaKnown RBP20.13■□□□□ 0.81
HSPG2-205ENST00000427897 GPS1Q13098 491 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PACS1Q6VY07 963 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 HOOK3Q86VS8 718 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PPP1R3BQ86XI6 285 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 REXO1L1PQ8IX06 675 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 SLC35F6Q8N357 371 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PRELID2Q8N945 189 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 MS4A14Q96JA4 679 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 MAP3K3Q99759 626 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 AP1M1Q9BXS5 423 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 MVB12BQ9H7P6 319 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 GPN2Q9H9Y4 310 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-205ENST00000427897 SOHLH2Q9NX45 425 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PILRAQ9UKJ1 303 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 PCDHGA4Q9Y5G9 962 aa20.13■□□□□ 0.81
HSPG2-205ENST00000427897 IGHV5-51A0A0C4DH38 117 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 TLCD2A6NGC4 264 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 MATN2O00339 956 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 CDH3P22223 829 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 PPP1CAP62136 330 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 CRADDP78560 199 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 PLOD1Q02809 727 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-205ENST00000427897 ACY1Q03154 408 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 C19orf57Q0VDD7 668 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 PRKG2Q13237 762 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 TMTC4Q5T4D3 741 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 KMT5CQ86Y97 462 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 ESX1Q8N693 406 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 STAMBPL1Q96FJ0 436 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 WBP1Q96G27 269 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 OR52A5Q9H2C5 316 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 SIDT1Q9NXL6 827 aaKnown RBP20.12■□□□□ 0.81
HSPG2-205ENST00000427897 RARRES3Q9UL19 164 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 PYCARDQ9ULZ3 195 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 ASF1AQ9Y294 204 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 PRSS21Q9Y6M0 314 aa20.12■□□□□ 0.81
HSPG2-205ENST00000427897 GOLGA6L10A0A0M3HER8 536 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 PGRMC1O00264 195 aaKnown RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 PFDN6O15212 129 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 CD3EAPO15446 510 aaKnown RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 KDM1AO60341 852 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 OR1I1O60431 355 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 CCNYL3P0C7X3 344 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 LIFP15018 202 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 ITGB6P18564 788 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 MGAT1P26572 445 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms