RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LRRC14BA6NHZ5 514 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 KMOO15229 486 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 NR1D1P20393 614 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 KCNA4P22459 653 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CCNFP41002 786 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 C21orf59P57076 290 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 YPEL5P62699 121 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 TCF15Q12870 199 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 ZNF658BQ4V348 819 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 PARGQ86W56 976 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 NRROSQ86YC3 692 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 LRRC61Q9BV99 259 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 ZNF292O60281 2723 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 AP2A2O94973 939 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 APOA4P06727 396 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 LTA4HP09960 611 aaKnown RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 NXPH1P58417 271 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CLCA4Q14CN2 919 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 ISCA2Q86U28 154 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 TAX1BP1Q86VP1 789 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 ZNF761Q86XN6 746 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 IMP3Q9NV31 184 aaKnown RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CORO1CQ9ULV4 474 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 SLC5A10A0PJK1 596 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 H3BM21 787 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 UBXN8O00124 270 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
PRPF39-202ENST00000424478 FFAR2O15552 330 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 GPC4O75487 556 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 KLHL2O95198 593 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 MPOP05164 745 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 CTSEP14091 401 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 TEAD1P28347 426 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
PRPF39-202ENST00000424478 COL9A2Q14055 689 aaPredicted RBP13.15□□□□□ -0.3
PRPF39-202ENST00000424478 LRRC8EQ6NSJ5 796 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 ZCCHC23Q6ZST2 131 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 LMX1AQ8TE12 382 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 ASZ1Q8WWH4 475 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 IQCGQ9H095 443 aaKnown RBP13.15□□□□□ -0.3
PRPF39-202ENST00000424478 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 GPR34Q9UPC5 381 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 CHN1P15882 459 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.39e-11■□□□□ 9.8
PRPF39-202ENST00000424478 DEFB133Q30KQ1 61 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 TAF8Q7Z7C8 310 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 OR5AR1Q8NGP9 310 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 PHF21BQ96EK2 531 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 GTPBP2Q9BX10 602 aaKnown RBP13.15□□□□□ -0.3
PRPF39-202ENST00000424478 NMRAL1Q9HBL8 299 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 MED4Q9NPJ6 270 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
PRPF39-202ENST00000424478 MAGEC1O60732 1142 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 KELP23276 732 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ATP5DP30049 168 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 CCR10P46092 362 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 TMEM151AQ8N4L1 468 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 RMDN2Q96LZ7 410 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 RAPGEFL1Q9UHV5 662 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ASB1Q9Y576 335 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 COMMD10Q9Y6G5 202 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 TNFP01375 233 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 TSPAN8P19075 237 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 SKIV2L2P42285 1042 aaKnown RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 CCT5P48643 541 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 GRIK2Q13002 908 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 GPS2Q13227 327 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 CROCCP2Q86T23 111 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 SYT12Q8IV01 421 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 IL17FQ96PD4 163 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 FAM126AQ9BYI3 521 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 STMN4Q9H169 189 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ZNF395Q9H8N7 513 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 PCDHGA2Q9Y5H1 932 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 A0A087X1B8 175 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 B4DGG1 531 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 VILLO15195 856 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 DGKAP23743 735 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 CRHR1P34998 444 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 PTK2BQ14289 1009 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 FAM83EQ2M2I3 478 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ZNF528Q3MIS6 628 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 UGT3A1Q6NUS8 523 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 MYO1HQ8N1T3 1032 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms