RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 SEC16AO15027 2179 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 SMIM30A4D0T7 59 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 AP3D1O14617 1153 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 CASKO14936 926 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 ACRP10323 421 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 FMO3P31513 532 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 SRSF11Q05519 484 aaKnown RBP10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 BNIP3Q12983 259 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 PDE12Q6L8Q7 609 aaKnown RBP10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 SMARCD3Q6STE5 483 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 TAS1R3Q7RTX0 852 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 CDH24Q86UP0 819 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 ZNF433Q8N7K0 673 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 CITED4Q96RK1 184 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 YIPF4Q9BSR8 244 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 TOR3AQ9H497 397 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
SEMA4D-208ENST00000422704 A0A1B0GVM2 712 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 TCAF2A6NFQ2 919 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 GNB5O14775 395 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 HCN1O60741 890 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 RPN2P04844 631 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ITPKBP27987 946 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 NADK2Q4G0N4 442 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 NANOGNBQ7Z5D8 188 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 KRT77Q7Z794 578 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ZC3HC1Q86WB0 502 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 CD99L2Q8TCZ2 262 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 MAGEC3Q8TD91 643 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 GFM1Q96RP9 751 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 IL4I1Q96RQ9 567 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 NODALQ96S42 347 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 IGSF9Q9P2J2 1179 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 DERAQ9Y315 318 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 OAS3Q9Y6K5 1087 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 PSME4Q14997 1843 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 A0A1W2PRU2 124 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 LIN7AO14910 233 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 RSL1D1O76021 490 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 BEST1O76090 585 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 GANABQ14697 944 aaKnown RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 SNAPC1Q16533 368 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ZDHHC21Q8IVQ6 265 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ZDHHC14Q8IZN3 488 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ZBTB2Q8N680 514 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 KLHL23Q8NBE8 558 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 OR5AK3PQ8NH89 298 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 EZH1Q92800 747 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 UROC1Q96N76 676 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 CCDC28BQ9BUN5 200 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ELL3Q9HB65 397 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ABCB8Q9NUT2 735 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 POLR3BQ9NW08 1133 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 OXSMQ9NWU1 459 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 KIAA1522Q9P206 1035 aaPredicted RBP10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ATRNL1Q5VV63 1379 aa10.46□□□□□ -0.74
SEMA4D-208ENST00000422704 ADAMTSL1Q8N6G6 1762 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 ABHD14A-ACY1A0A1B0GW23 586 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 MEIS3P2A8K0S8 358 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 TNFRSF11BO00300 401 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 HAT1O14929 419 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 NOS1APO75052 506 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 CCNYL3P0C7X3 344 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 SAGP10523 405 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 GLUD2P49448 558 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 UGT2B15P54855 530 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 PRKCZQ05513 592 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 KCNJ11Q14654 390 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 CNPY1Q3B7I2 92 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 BRI3BPQ8WY22 251 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 MYDGFQ969H8 173 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 AHCYL2Q96HN2 611 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 DEC1Q9P2X7 70 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 CYTH4Q9UIA0 394 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 ZNF222Q9UK12 451 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 FBXW2Q9UKT8 454 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 SVILO95425 2214 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 TBX1O43435 398 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 TLL1O43897 1013 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 DUSP11O75319 330 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 TGFB1P01137 390 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 MAPK8P45983 427 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 DIO3P55073 304 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 ARF5P84085 180 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 IL18R1Q13478 541 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 SFT2D3Q587I9 215 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 C1orf220Q5T0J3 134 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 CAPN13Q6MZZ7 669 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 SLC2A7Q6PXP3 512 aa10.45□□□□□ -0.74
SEMA4D-208ENST00000422704 C6orf89Q6UWU4 347 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms