RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LRRK2Q5S007 2527 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 PIPSLA2A3N6 862 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 OR6C74A6NCV1 312 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 NTRK1P04629 796 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 ATP1B2P14415 290 aaPredicted RBP16.91■□□□□ 0.3
MSH6-203ENST00000420813 PRKAA1Q13131 559 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 GSE1Q14687 1217 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 CERS6Q6ZMG9 384 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 CFAP206Q8IYR0 622 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 ACVR1CQ8NER5 493 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 CCDC110Q8TBZ0 833 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 ZNF501Q96CX3 271 aaPredicted RBP16.91■□□□□ 0.3
MSH6-203ENST00000420813 LRFN5Q96NI6 719 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 KCND1Q9NSA2 647 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 FAM8A1Q9UBU6 413 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 MAN2B2Q9Y2E5 1009 aa16.91■□□□□ 0.3
MSH6-203ENST00000420813 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
MSH6-203ENST00000420813 IGLV3-16A0A075B6K0 115 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 SOWAHDA6NJG2 315 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 H7C0S8 307 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 LDB2O43679 373 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 SCRG1O75711 98 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 POLBP06746 335 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 PTPN4P29074 926 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 KPNA2P52292 529 aaKnown RBP16.9■□□□□ 0.3
MSH6-203ENST00000420813 NAP1L1P55209 391 aaKnown RBP16.9■□□□□ 0.3
MSH6-203ENST00000420813 RPS15P62841 145 aaKnown RBP16.9■□□□□ 0.3
MSH6-203ENST00000420813 SEMA5AQ13591 1074 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 KRT33BQ14525 404 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 UGT8Q16880 541 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 ZNF517Q6ZMY9 492 aaPredicted RBP16.9■□□□□ 0.3
MSH6-203ENST00000420813 SYVN1Q86TM6 617 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 TMEM135Q86UB9 458 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 LILRA3Q8N6C8 439 aaPredicted RBP16.9■□□□□ 0.3
MSH6-203ENST00000420813 NAT14Q8WUY8 206 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 THAP4Q8WY91 577 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 ALG3Q92685 438 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 COL26A1Q96A83 441 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 VPS37BQ9H9H4 285 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 SYTL2Q9HCH5 934 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 C1GALT1Q9NS00 363 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 SOHLH2Q9NX45 425 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 ZDHHC3Q9NYG2 299 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 POMT2Q9UKY4 750 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 DUSP10Q9Y6W6 482 aa16.9■□□□□ 0.3
MSH6-203ENST00000420813 TRBV5-4A0A0C4DH59 114 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 GSTM1P09488 218 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 MSL3P1P0C860 447 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 MC4RP32245 332 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 CD151P48509 253 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 TMPRSS15P98073 1019 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 GSTM4Q03013 218 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 LAMB3Q13751 1172 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 GPR19Q15760 415 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 COLEC12Q5KU26 742 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 KCTD11Q693B1 232 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 TMEM126BQ8IUX1 230 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 FAM118BQ9BPY3 351 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 COG4Q9H9E3 785 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 AKIRIN1Q9H9L7 192 aaPredicted RBP16.89■□□□□ 0.29
MSH6-203ENST00000420813 FANCEQ9HB96 536 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 TLK1Q9UKI8 766 aa16.89■□□□□ 0.29
MSH6-203ENST00000420813 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
MSH6-203ENST00000420813 POLR2CP19387 275 aaPredicted RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 CDH3P22223 829 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 ACRV1P26436 265 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 GSDMDP57764 484 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 RPA4Q13156 261 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 GPS2Q13227 327 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 PARP6Q2NL67 630 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 ZNF658BQ4V348 819 aaPredicted RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 AADACL2Q6P093 401 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 FAM199XQ6PEV8 388 aaPredicted RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 ASB18Q6ZVZ8 466 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 TEX19Q8NA77 164 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 LCN9Q8WX39 176 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 DNAJC1Q96KC8 554 aaKnown RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 LACRTQ9GZZ8 138 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 OR52A5Q9H2C5 316 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 SRMSQ9H3Y6 488 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 FAM96AQ9H5X1 160 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 NLE1Q9NVX2 485 aaPredicted RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 FARSAQ9Y285 508 aaKnown RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 FER1L5A0AVI2 2057 aa16.88■□□□□ 0.29
MSH6-203ENST00000420813 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 RP1L1Q8IWN7 2480 aaPredicted RBP16.88■□□□□ 0.29
MSH6-203ENST00000420813 GRID2IPA4D2P6 1211 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 GOLGA6L9A6NEM1 432 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 SLC9B1P1A6NJY1 282 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 K7EM74 188 aa16.87■□□□□ 0.29
MSH6-203ENST00000420813 IFRD1O00458 451 aaPredicted RBP16.87■□□□□ 0.29
MSH6-203ENST00000420813 KLK3P07288 261 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms