RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.61■□□□□ 0.41
VCP-202ENST00000417448 HACD3Q9P035 362 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 FKBPLQ9UIM3 349 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 NEU2Q9Y3R4 380 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 PRKAB1Q9Y478 270 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 PCYT1BQ9Y5K3 369 aaPredicted RBP17.61■□□□□ 0.41
VCP-202ENST00000417448 GOLGA6L10A0A0M3HER8 536 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 STX7O15400 261 aaKnown RBP17.6■□□□□ 0.41
VCP-202ENST00000417448 MTX2O75431 263 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 CREG1O75629 220 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 ASMTLO95671 621 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 LPOP22079 712 aaPredicted RBP17.6■□□□□ 0.41
VCP-202ENST00000417448 HMGCLP35914 325 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 PTGIRP43119 386 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 CRADDP78560 199 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 PEX6Q13608 980 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 TAF1AQ15573 450 aaPredicted RBP17.6■□□□□ 0.41
VCP-202ENST00000417448 INPP5JQ15735 1006 aaPredicted RBP17.6■□□□□ 0.41
VCP-202ENST00000417448 CPZQ66K79 652 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 ADAMTSL4Q6UY14 1074 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 Q8NA96 180 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 BRSK1Q8TDC3 778 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 NAT14Q8WUY8 206 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 PPP1R2P1Q96PQ5 205 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 OR2M4Q96R27 311 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 TRABDQ9H4I3 376 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 KCTD5Q9NXV2 234 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 LUZP4Q9P127 313 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 PIKFYVEQ9Y2I7 2098 aa17.6■□□□□ 0.41
VCP-202ENST00000417448 PIPSLA2A3N6 862 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 GAPDHSO14556 408 aaPredicted RBP17.59■□□□□ 0.41
VCP-202ENST00000417448 LDB2O43679 373 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 SUN1O94901 812 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 PRSS56P0CW18 603 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 PAFAH1B1P43034 410 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 SESN2P58004 480 aaPredicted RBP17.59■□□□□ 0.41
VCP-202ENST00000417448 HHEXQ03014 270 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 NFATC2Q13469 925 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 ATP13A5Q4VNC0 1218 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 KHDC1Q4VXA5 237 aaKnown RBP17.59■□□□□ 0.41
VCP-202ENST00000417448 DNAJC1Q96KC8 554 aaKnown RBP17.59■□□□□ 0.41
VCP-202ENST00000417448 MLXIPLQ9NP71 852 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 PKP3Q9Y446 797 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 CROCCQ5TZA2 2017 aa17.59■□□□□ 0.41
VCP-202ENST00000417448 RGSL1A5PLK6 1076 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 C2orf81A6NN90 581 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 GOLGA8MH3BSY2 632 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 KIAA0754O94854 1291 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 SPAM1P38567 509 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 MAPK9P45984 424 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 FNTAP49354 379 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 PGDP52209 483 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 ZNF140P52738 457 aaPredicted RBP17.58■□□□□ 0.4
VCP-202ENST00000417448 SH3BP2P78314 561 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 FOXM1Q08050 763 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 C2orf54Q08AI8 447 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 CHAF1BQ13112 559 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 PPP1R7Q15435 360 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 PYCR3Q53H96 274 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 LINC00523Q86TU6 105 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 NLRP8Q86W28 1048 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 TRAM1L1Q8N609 369 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 LRRC45Q96CN5 670 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 COX14Q96I36 57 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.4
VCP-202ENST00000417448 TRIM51Q9BSJ1 452 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 SLC2A6Q9UGQ3 507 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 KCND3Q9UK17 655 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 PCDHGA6Q9Y5G7 932 aa17.58■□□□□ 0.4
VCP-202ENST00000417448 MN1Q10571 1320 aaPredicted RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 AKAP9Q99996 3911 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 NF1P21359 2839 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 ERI2A8K979 691 aaKnown RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 AVILO75366 819 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 SLC25A14O95258 325 aaPredicted RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 CRTAMO95727 393 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 ANKRD34CP0C6C1 535 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 PRF1P14222 555 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 CDKN1CP49918 316 aaPredicted RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 GFERP55789 205 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 CDH17Q12864 832 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 KCNJ11Q14654 390 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 ZNF534Q76KX8 674 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 CPT1BQ92523 772 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 STAMBPL1Q96FJ0 436 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 ZNF778Q96MU6 729 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 RUFY1Q96T51 708 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 KRT12Q99456 494 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 SLC25A23Q9BV35 468 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 OR2AG1Q9H205 316 aa17.57■□□□□ 0.4
VCP-202ENST00000417448 SARS2Q9NP81 518 aaKnown RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 PCDHGA9Q9Y5G4 932 aaKnown RBP17.57■□□□□ 0.4
VCP-202ENST00000417448 GLYATL1P3A0A0U1RQE8 302 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 OR51F1A6NGY5 319 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 TTI1O43156 1089 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 URI1O94763 535 aaPredicted RBP17.56■□□□□ 0.4
VCP-202ENST00000417448 TMEM63AO94886 807 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 RECKO95980 971 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 MGAT1P26572 445 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 TEAD1P28347 426 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms