RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NCKAP1Q9Y2A7 1128 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 OR14I1A6ND48 311 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 RASGRP1O95267 797 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 RPIAP49247 311 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 PCBP2Q15366 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
UBR4-205ENST00000417040 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 KIAA1161Q6NSJ0 714 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 AKAP7Q9P0M2 348 aaPredicted RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 PLOD2O00469 737 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 ELFN1P0C7U0 828 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 SLC2A2P11168 524 aaPredicted RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 TSTQ16762 297 aaKnown RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 TOR1AIP1Q5JTV8 583 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 METTL21CQ5VZV1 264 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 STRADAQ7RTN6 431 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 ADAMTS15Q8TE58 950 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 STON2Q8WXE9 905 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 ABHD16BQ9H3Z7 469 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 ZBED5Q49AG3 693 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 TXNRD3NBQ6F5E7 133 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 LCLAT1Q6UWP7 414 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 YIPF4Q9BSR8 244 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 PCCBP05166 539 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 ZNF806P0C7X5 589 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 PDCD4Q53EL6 469 aaKnown RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 DCLRE1AQ6PJP8 1040 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 SLC2A7Q6PXP3 512 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 CHSY3Q70JA7 882 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 BEND5Q7L4P6 421 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 PHC2Q8IXK0 858 aa11.88□□□□□ -0.51
UBR4-205ENST00000417040 SPIN1Q9Y657 262 aaPredicted RBP11.88□□□□□ -0.51
UBR4-205ENST00000417040 SCELO95171 688 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SIX3O95343 332 aaPredicted RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 OPN1SWP03999 348 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CYP11A1P05108 521 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 LMO2P25791 158 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TGFBIQ15582 683 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CENPSQ8N2Z9 138 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ZNF317Q96PQ6 595 aaPredicted RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 IL4I1Q96RQ9 567 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 GBA2Q9HCG7 927 aaPredicted RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 NRCAMQ92823 1304 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 STBD1O95210 358 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 LINGO3P0C6S8 592 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SLC7A1P30825 629 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 RPS3AP61247 264 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 SMAD3P84022 425 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 GFOD2Q3B7J2 385 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TPRG1LQ5T0D9 272 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 FATE1Q969F0 183 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 BEX2Q9BXY8 128 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 POLR2J2Q9GZM3 115 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 SLC22A4Q9H015 551 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 BEX1Q9HBH7 125 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 NUDT4Q9NZJ9 180 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DNAJB9Q9UBS3 223 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ACOX3O15254 700 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 MAGEB3O15480 346 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 NPHS1O60500 1241 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 PRAMEF1O95521 474 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SLC35G4P0C7Q5 338 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 GRM5P41594 1212 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DNASE1L1P49184 302 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DUSP4Q13115 394 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CAMK1Q14012 370 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CAPN13Q6MZZ7 669 aaPredicted RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 OR5AK3PQ8NH89 298 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 WRAP53Q9BUR4 548 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 STK16O75716 305 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SERPINA3P01011 423 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CD247P20963 164 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 NT5EP21589 574 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ZNF234Q14588 700 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 SF1Q15637 639 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 MSS51Q4VC12 460 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 KIAA1324Q6UXG2 1013 aaKnown RBP11.87□□□□□ -0.51
UBR4-205ENST00000417040 PCDH19Q8TAB3 1148 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TMCO6Q96DC7 493 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DCSTAMPQ9H295 470 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 AKTIPQ9H8T0 292 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 C3orf14Q9HBI5 128 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CKLFQ9UBR5 152 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms