RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 VWA7Q9Y334 891 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 OR5K4A6NMS3 321 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 BBIP1A8MTZ0 92 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 E5RI56 91 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 BTN3A3O00478 584 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PMPCBO75439 489 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PDE9AO76083 593 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 CYBAP13498 195 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ATP6V1B2P21281 511 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 NOS2P35228 1153 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 GNPDA1P46926 289 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 APLP1P51693 650 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 NRLP54845 237 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 GPR85P60893 370 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 MVKQ03426 396 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 FAPQ12884 760 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 UGP2Q16851 508 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 LEXMQ3ZCV2 418 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 KLHL12Q53G59 568 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PIK3R6Q5UE93 754 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 LIPMQ5VYY2 423 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 TRMT10BQ6PF06 316 aaKnown RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 ATPAF2Q8N5M1 289 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 TOP6BLQ8N6T0 577 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 FNDC5Q8NAU1 212 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 OR8H1Q8NGG4 311 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 DNAJA4Q8WW22 397 aaPredicted RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 WNT8BQ93098 351 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 TOE1Q96GM8 510 aaKnown RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 ROGDIQ9GZN7 287 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.72□□□□□ -1.171e-6■■■■■ 43.7
SIK3-203ENST00000415541 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 SOX17Q9H6I2 414 aaPredicted RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 NIPAL2Q9H841 368 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 NMRAL1Q9HBL8 299 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 COQ3Q9NZJ6 369 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 CCDC167Q9P0B6 97 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PCDH10Q9P2E7 1040 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 EIF3KQ9UBQ5 218 aaKnown RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PCDHGB6Q9Y5F9 930 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ATP6AP2A0A1C7CYW4 349 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 OR5F1O95221 314 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 F9P00740 461 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ICAM2P13598 275 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 SELPP16109 830 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 MSH3P20585 1137 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 IL1R2P27930 398 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 RAB14P61106 215 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 LCN8Q6JVE9 175 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 STRADAQ7RTN6 431 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 METTL3Q86U44 580 aaKnown RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 ZDHHC17Q8IUH5 632 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 PHC2Q8IXK0 858 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ADGRG5Q8IZF4 528 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 WDTC1Q8N5D0 677 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 FAM83FQ8NEG4 500 aaPredicted RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 IPMKQ8NFU5 416 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 KLHL6Q8WZ60 621 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 AKAP1Q92667 903 aaKnown RBP eCLIP7.72□□□□□ -1.17
SIK3-203ENST00000415541 RNF157Q96PX1 679 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 SECISBP2Q96T21 854 aaKnown RBP7.72□□□□□ -1.17
SIK3-203ENST00000415541 NAT9Q9BTE0 207 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 BCO2Q9BYV7 579 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ZNF385DQ9H6B1 395 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 MIOSQ9NXC5 875 aa7.72□□□□□ -1.17
SIK3-203ENST00000415541 ZNFX1Q9P2E3 1918 aaKnown RBP7.71□□□□□ -1.17
SIK3-203ENST00000415541 SCO1O75880 301 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 ALDOAP04075 364 aaKnown RBP7.71□□□□□ -1.17
SIK3-203ENST00000415541 IL7RP16871 459 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 TIE1P35590 1138 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 UGT2B10P36537 528 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 GRIA4P48058 902 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 RAB25P57735 213 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 INCA1Q0VD86 236 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 BTBD16Q32M84 506 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 TRIM60Q495X7 471 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 STK32CQ86UX6 486 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 SERINC5Q86VE9 423 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 RETREG3Q86VR2 466 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 TNS4Q8IZW8 715 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 PYROXD2Q8N2H3 581 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 PARP16Q8N5Y8 322 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 FANK1Q8TC84 345 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 TRIM62Q9BVG3 475 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 SLIRPQ9GZT3 109 aaKnown RBP7.71□□□□□ -1.17
SIK3-203ENST00000415541 CCNB1IP1Q9NPC3 277 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 PNMA8BQ9ULN7 279 aaPredicted RBP7.71□□□□□ -1.17
SIK3-203ENST00000415541 MAFFQ9ULX9 164 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 NDUFAF1Q9Y375 327 aa7.71□□□□□ -1.17
SIK3-203ENST00000415541 A0A0G2JMP0 313 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 HMX2A2RU54 273 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 MEIOCA2RUB1 952 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 NDUFA2O43678 99 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 ITGALP20701 1170 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 CD9P21926 228 aa7.71□□□□□ -1.18
SIK3-203ENST00000415541 CSTF2P33240 577 aaKnown RBP eCLIP7.71□□□□□ -1.183e-6■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms