RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 POLG2Q9UHN1 485 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 PCTPQ9UKL6 214 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 ZNF510Q9Y2H8 683 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 PCDHGC4Q9Y5F7 938 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 OR51B4Q9Y5P0 310 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 DNAH14Q0VDD8 3507 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 CEP250Q9BV73 2442 aa14.58□□□□□ -0.08
USP4-203ENST00000415188 NPEPPSL1A6NEC2 478 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 CAPN8A6NHC0 703 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 E5RI56 91 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 CDC7O00311 574 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ANGPT2O15123 496 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 TBL1XO60907 577 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 OLFM2O95897 454 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 HSD17B1P14061 328 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 RPS6KA2Q15349 733 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 EML3Q32P44 896 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 XKR7Q5GH72 579 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ARMC12Q5T9G4 340 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 LYPLAL1Q5VWZ2 237 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PSAPL1Q6NUJ1 521 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 Q6ZNB5 142 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PIANPQ8IYJ0 282 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 CARNMT1Q8N4J0 409 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 CPA6Q8N4T0 437 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 TMEM102Q8N9M5 508 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 TUBGCP3Q96CW5 907 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 LINGO1Q96FE5 620 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 MYO19Q96H55 970 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ZFRQ96KR1 1074 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 KLHL32Q96NJ5 620 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PKP2Q99959 881 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 P2RY13Q9BPV8 354 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 FEM1AQ9BSK4 669 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 P2RY12Q9H244 342 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PARD6AQ9NPB6 346 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 NDUFA13Q9P0J0 144 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 DHRS7Q9Y394 339 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 AP4S1Q9Y587 144 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 TNPO3Q9Y5L0 923 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 SLC30A1Q9Y6M5 507 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ATP6AP2A0A1C7CYW4 349 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 DYTNA2CJ06 578 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PRORSD1PA6NEY8 169 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 AQP12BA6NM10 295 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 NR5A2O00482 541 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PRMT5O14744 637 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 SCAMP3O14828 347 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 SNAP91O60641 907 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ATP6AP2O75787 350 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PGLSO95336 258 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 HGFP14210 728 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 TGM1P22735 817 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 HMGCLP35914 325 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PXNP49023 591 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 SIM2Q14190 667 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 PDCD4Q53EL6 469 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 RETSATQ6NUM9 610 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 UGT2A3Q6UWM9 527 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 GPRIN3Q6ZVF9 776 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 ADAMTSL2Q86TH1 951 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 DHFR2Q86XF0 187 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 SPNS2Q8IVW8 549 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 AQP12AQ8IXF9 295 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 LILRA2Q8N149 483 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 RNF148Q8N7C7 305 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 GRIN3AQ8TCU5 1115 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 EZH1Q92800 747 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 C2orf49Q9BVC5 232 aaPredicted RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 TRIM54Q9BYV2 358 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 GPR63Q9BZJ6 419 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 BRINP2Q9C0B6 783 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 TUBB1Q9H4B7 451 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 AIG1Q9NVV5 245 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 SMPD4Q9NXE4 827 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 PLK2Q9NYY3 685 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 VPS51Q9UID3 782 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 LSM7Q9UK45 103 aaKnown RBP14.57□□□□□ -0.08
USP4-203ENST00000415188 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 IKZF3Q9UKT9 509 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
USP4-203ENST00000415188 SCN8AQ9UQD0 1980 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 ATG2BQ96BY7 2078 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 C15orf38-AP3S2A0A0A6YYH1 394 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 LRRC14BA6NHZ5 514 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 LEFTY2O00292 366 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 TXNDC9O14530 226 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 AHCYL1O43865 530 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 DNAJA2O60884 412 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 SOCS5O75159 536 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 NIPSNAP2O75323 286 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 S100BP04271 92 aaPredicted RBP14.56□□□□□ -0.08
USP4-203ENST00000415188 TCF3P15923 654 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 ZNF7P17097 686 aaPredicted RBP14.56□□□□□ -0.08
USP4-203ENST00000415188 MZF1P28698 734 aaPredicted RBP14.56□□□□□ -0.08
USP4-203ENST00000415188 SLC7A2P52569 658 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 FOXA1P55317 472 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 CDH18Q13634 790 aa14.56□□□□□ -0.08
USP4-203ENST00000415188 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms