RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PAIP1Q9H074 479 aaKnown RBP9.7□□□□□ -0.86
SS18-203ENST00000415083 RNF38Q9H0F5 515 aa9.7□□□□□ -0.86
SS18-203ENST00000415083 ARMC7Q9H6L4 198 aa9.7□□□□□ -0.86
SS18-203ENST00000415083 PMF1-BGLAPU3KQ54 211 aa9.7□□□□□ -0.86
SS18-203ENST00000415083 NUP214P35658 2090 aaPredicted RBP9.7□□□□□ -0.86
SS18-203ENST00000415083 KRT87PA6NCN2 255 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ZBTB11O95625 1053 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 ALPIP09923 528 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 FCGR1AP12314 374 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 JAK1P23458 1154 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ISL1P61371 349 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CD47Q08722 323 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CTF1Q16619 201 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CDKN3Q16667 212 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 IMPG1Q17R60 797 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CTXN3Q4LDR2 81 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ZNF554Q86TJ5 538 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SLC22A15Q8IZD6 547 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NKAPQ8N5F7 415 aaKnown RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 OR10A6Q8NH74 314 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 FBLIM1Q8WUP2 373 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 AURKBQ96GD4 344 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 CNDP2Q96KP4 475 aaKnown RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 GORASP2Q9H8Y8 452 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ZMYM5Q9UJ78 669 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NAALAD2Q9Y3Q0 740 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 H7C0S8 307 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 GIPC1O14908 333 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ACSL4O60488 711 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 THRBP10828 461 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 IMPDH2P12268 514 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CDKN2CP42773 168 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 HSPA7P48741 367 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 PRKG2Q13237 762 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 GBX1Q14549 363 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 AP5B1Q2VPB7 878 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ZNF829Q3KNS6 432 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 FAM171A1Q5VUB5 890 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 C16orf59Q7L2K0 433 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 DET1Q7L5Y6 550 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 FBXO30Q8TB52 745 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 KCNJ9Q92806 393 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NSMCE2Q96MF7 247 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SARS2Q9NP81 518 aaKnown RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 CD274Q9NZQ7 290 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 IL17CQ9P0M4 197 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 UBA2Q9UBT2 640 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 KIAA1671Q9BY89 1806 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 IQCA1LA6NCM1 817 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 K7EPI3 171 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 K7ERQ8 282 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 MITFO75030 526 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 INMTO95050 263 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 RAP2AP10114 183 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CKBP12277 381 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ITGB6P18564 788 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 LPOP22079 712 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 IL2P60568 153 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 GTF2H2Q13888 395 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 ATP6AP1LQ52LC2 224 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SPANXN4Q5MJ08 99 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 LDLRAP1Q5SW96 308 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 GTF2H2CQ6P1K8 395 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NCEH1Q6PIU2 408 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NECAB2Q7Z6G3 386 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 DENND1CQ8IV53 801 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 CLDN19Q8N6F1 224 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 EFHBQ8N7U6 833 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 GABPB2Q8TAK5 448 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 METTL6Q8TCB7 284 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NETO1Q8TDF5 533 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SEPT5Q99719 369 aaPredicted RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 TUBA1CQ9BQE3 449 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 NEURL2Q9BR09 285 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SPON2Q9BUD6 331 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 MAGEH1Q9H213 219 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 HPS4Q9NQG7 708 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 TLR8Q9NR97 1041 aaKnown RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 RIC8BQ9NVN3 520 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 AGO1Q9UL18 857 aaKnown RBP9.69□□□□□ -0.86
SS18-203ENST00000415083 DHRS7Q9Y394 339 aa9.69□□□□□ -0.86
SS18-203ENST00000415083 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ARVCFO00192 962 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 FFAR3O14843 346 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 GPR42O15529 346 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PRAMEF4O60810 478 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ADAM23O75077 832 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ANXA6P08133 673 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 MZF1P28698 734 aaPredicted RBP9.68□□□□□ -0.86
SS18-203ENST00000415083 CLCN4P51793 760 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 KCNAB2Q13303 367 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 CRHR2Q13324 411 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 ZRANB3Q5FWF4 1079 aa9.68□□□□□ -0.86
SS18-203ENST00000415083 PRAMEF9Q5VWM5 478 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms