RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NLGN4YQ8NFZ3 816 aaPredicted RBP9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 LCN9Q8WX39 176 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 TTC9Q92623 222 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 EXTL1Q92935 676 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 MAGOHBQ96A72 148 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 RANBP9Q96S59 729 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 C19orf43Q9BQ61 176 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 SPRY4Q9C004 299 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 SEMA4CQ9C0C4 833 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 B3GNT4Q9C0J1 378 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 KLHL25Q9H0H3 589 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 OR52A5Q9H2C5 316 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 KIR3DX1Q9H7L2 352 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 SIDT1Q9NXL6 827 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 JRKLQ9Y4A0 524 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
NCKIPSD-202ENST00000413374 GSAPA4D1B5 854 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KLHL33A6NCF5 533 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 OR5K3A6NET4 321 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 GOLGA8KD6RF30 607 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 GOLGA8TH3BQL2 631 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ERVH48-1M5A8F1 160 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 BTN3A3O00478 584 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 TOX3O15405 576 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 AVILO75366 819 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 SPAG6O75602 509 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 AP2A2O94973 939 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KRT14P02533 472 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 OR56A5P0C7T3 313 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 EBLN1P0CF75 366 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 NELFEP18615 380 aaKnown RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 PSMA3P25788 255 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 NPY2RP49146 381 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KPNA2P52292 529 aaKnown RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 GPS1Q13098 491 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 LAMB3Q13751 1172 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 BOP1Q14137 746 aaKnown RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ITIH4Q14624 930 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ZNF658BQ4V348 819 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 SYTL3Q4VX76 610 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 PRSS42Q7Z5A4 293 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KRT222Q8N1A0 295 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 GALNT6Q8NCL4 622 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 OR52E1Q8NGJ3 308 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 COG1Q8WTW3 980 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 TFGQ92734 400 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 PBKQ96KB5 322 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 TEFMQ96QE5 360 aaKnown RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 TTC1Q99614 292 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ARHGAP9Q9BRR9 750 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 HGH1Q9BTY7 390 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ULBP3Q9BZM4 244 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 RAB33BQ9H082 229 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 KCNF1Q9H3M0 494 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 SRMSQ9H3Y6 488 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 SYBUQ9NX95 663 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 BFARQ9NZS9 450 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 MARCH4Q9P2E8 410 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 EPHA6Q9UF33 1036 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 PLAGL1Q9UM63 463 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 ZKSCAN5Q9Y2L8 839 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 TDRKHQ9Y2W6 561 aaKnown RBP9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
NCKIPSD-202ENST00000413374 CHD6Q8TD26 2715 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 SLC9B1P1A6NJY1 282 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 GOLGA8MH3BSY2 632 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ZNF185O15231 689 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CD3EAPO15446 510 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 NKX2-8O15522 239 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 C1QL1O75973 258 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 TIAF1O95411 115 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 FTH1P02794 183 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 NTRK1P04629 796 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 PRKAR1AP10644 381 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CDH3P22223 829 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 MAP4P27816 1152 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 NDUFS1P28331 727 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CCR7P32248 378 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 COILP38432 576 aaPredicted RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 HSPA14Q0VDF9 509 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ABRQ12979 859 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 PRKAA1Q13131 559 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 TUBB3Q13509 450 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 GPR19Q15760 415 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 TBR1Q16650 682 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LINC00303Q3SY05 128 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LYPLAL1Q5VWZ2 237 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ANKRD22Q5VYY1 191 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 C16orf46Q6P387 395 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LRRC8BQ6P9F7 803 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 C6orf15Q6UXA7 325 aaPredicted RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 C4orf22Q6V702 233 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms