RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GJB2P29033 226 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CDH12P55289 794 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SNX16P57768 344 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 VSNL1P62760 191 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PMP22Q01453 160 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 IFFO1Q0D2I5 559 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 ITGADQ13349 1161 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 XRCC4Q13426 336 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 RIPK1Q13546 671 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SNX1Q13596 522 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SLMAPQ14BN4 828 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 ARHGEF6Q15052 776 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 ADIPOQQ15848 244 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CAMK4Q16566 473 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 COL28A1Q2UY09 1125 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CCDC40Q4G0X9 1142 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 LACTB2Q53H82 288 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 ESCO2Q56NI9 601 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 DCAF6Q58WW2 860 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CMPK2Q5EBM0 449 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SGO1Q5FBB7 561 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 C6orf141Q5SZD1 244 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 MFSD4BQ5TF39 518 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 GKAP1Q5VSY0 366 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PLA2G4FQ68DD2 849 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 LRRC8EQ6NSJ5 796 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 UNQ6126/PRO20091Q6UXV3 157 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 MARK2Q7KZI7 788 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 LINGO2Q7L985 606 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SPATA21Q7Z572 469 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PATL1Q86TB9 770 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PRPF39Q86UA1 669 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 NOXA1Q86UR1 476 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 APLFQ8IW19 511 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CCDC170Q8IYT3 715 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 LYG1Q8N1E2 194 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CEP112Q8N8E3 955 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 BEST2Q8NFU1 509 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CEP76Q8TAP6 659 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 JAKMIP2Q96AA8 810 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 TMEM18Q96B42 140 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 DHX58Q96C10 678 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 ARHGEF26Q96DR7 871 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 TXNDC15Q96J42 360 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SLC41A2Q96JW4 573 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SEPT5Q99719 369 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 FAM110AQ9BQ89 295 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CRACR2AQ9BSW2 395 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 DCTN5Q9BTE1 182 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 TEX12Q9BXU0 123 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 API5Q9BZZ5 524 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 NPFFR1Q9GZQ6 430 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 LSG1Q9H089 658 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 TKTL2Q9H0I9 626 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SUDS3Q9H7L9 328 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 MAGEE1Q9HCI5 957 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 RANGRFQ9HD47 186 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SLC40A1Q9NP59 571 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 KCNMB3Q9NPA1 279 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CPSF2Q9P2I0 782 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 MORF4L1Q9UBU8 362 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CFDP1Q9UEE9 299 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CNOT8Q9UFF9 292 aaKnown RBP2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 SUN2Q9UH99 717 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 RPS6KA6Q9UK32 745 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 RCOR1Q9UKL0 485 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 HPCAL4Q9UM19 191 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PCDHGB4Q9UN71 923 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 PPP2R2CQ9Y2T4 447 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 NFE2L3Q9Y4A8 694 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 NFS1Q9Y697 457 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 CEPT1Q9Y6K0 416 aa2.43□□□□□ -2.02
HMGB3P2-201ENST00000411913 OVOS2A0A0G2JMS6 1433 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 PRG4Q92954 1404 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 ABCC6O95255 1503 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 TOPBP1Q92547 1522 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 ABCA9Q8IUA7 1624 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 SPHKAPQ2M3C7 1700 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 CRYBG1Q9Y4K1 1723 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 SPATA31D1Q6ZQQ2 1576 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 GPR75-ASB3A0A0A6YYF3 556 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 SYNDIG1LA6NDD5 238 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 C5orf60A6NFR6 353 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 FAM72CH0Y354 149 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 GOLGA6L19H0YKK7 550 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 P2RY10O00398 339 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 CHL1O00533 1208 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 PES1O00541 588 aaKnown RBP2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 P4HA2O15460 535 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 STX10O60499 249 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 PFKFB2O60825 505 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 DAB1O75553 588 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 ERAL1O75616 437 aaKnown RBP2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 NKX2-2O95096 273 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 NDUFB4O95168 129 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 PENKP01210 267 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 AMBPP02760 352 aa2.42□□□□□ -2.02
HMGB3P2-201ENST00000411913 RB1P06400 928 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms