RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 LTBP1Q14766 1721 aa-1.66□□□□□ -2.67
RNU4-88P-201ENST00000411220 SPTBN5Q9NRC6 3674 aaKnown RBP-1.66□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGLV3-12A0A075B6K2 115 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A0G2JLW4 131 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A1B0GUA9 196 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ARHGAP10A1A4S6 786 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MYBPHLA2RUH7 354 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM231BA6NCW3 169 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 DPRXA6NFQ7 191 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 LEUTXA8MZ59 168 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SHISA9B4DS77 424 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 G3V2L1 256 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMX2-CTNND1H3BSU7 103 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SEC14L5O43304 696 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 IDH3BO43837 385 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TBX19O60806 448 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDHD1O75717 1129 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ERLIN2O94905 339 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RTN3O95197 1032 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 OXTP01178 125 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CALCAP01258 141 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SMR3BP02814 79 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLPSP04118 112 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ENO1P06733 434 aaKnown RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 THRAP10827 490 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PCP11498 1178 aaKnown RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TDGF1P13385 188 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CEACAM1P13688 526 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ST6GAL1P15907 406 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MUC1P15941 1255 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FPR1P21462 350 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCNE1P24864 410 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PTAFRP25105 342 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PAX6P26367 422 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 GDI1P31150 447 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 GUCY1A2P33402 732 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SHMT1P34896 483 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAP2K2P36507 400 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAGEA12P43365 314 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF140P52738 457 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF137PP52743 207 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ST8SIA6P61647 398 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPP30P78346 268 aaKnown RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ASIC1P78348 528 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ATP8B2P98198 1209 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 OTUD4Q01804 1114 aaKnown RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ENPEPQ07075 957 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FUT5Q11128 374 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TCF15Q12870 199 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MYO1EQ12965 1108 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF177Q13360 481 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 VEZF1Q14119 521 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MFSD13AQ14CX5 517 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 EPHA7Q15375 998 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 DUSP7Q16829 419 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 LONRF2Q1L5Z9 754 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PLPPR5Q32ZL2 321 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CRY2Q49AN0 593 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ENTPD8Q5MY95 495 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCNYL2Q5T2Q4 361 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 C6orf52Q5T4I8 152 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TSPO2Q5TGU0 170 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ACSM2BQ68CK6 577 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SFRP4Q6FHJ7 346 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 BBS12Q6ZW61 710 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 USP50Q70EL3 339 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PRSS42Q7Z5A4 293 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 C5orf24Q7Z6I8 188 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SFR1Q86XK3 245 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 CBWD2Q8IUF1 395 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 UNC45BQ8IWX7 931 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SCML4Q8N228 414 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM19A2Q8N3H0 131 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 C2orf69Q8N8R5 385 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 Q8N9G6 341 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 BANPQ8N9N5 519 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZBTB34Q8NCN2 500 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 GIMAP1Q8WWP7 306 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RLN3Q8WXF3 142 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 TM9SF4Q92544 642 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 PHYHIPQ92561 330 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RSPRY1Q96DX4 576 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 NEK1Q96PY6 1258 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FEVQ99581 238 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 NRTNQ99748 197 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 FOXC2Q99958 501 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ANGPTL4Q9BY76 406 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZBP1Q9H171 429 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 HEXA-AS1Q9H8Q6 139 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPR35Q9HC97 309 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 GBA2Q9HCG7 927 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ABCC13Q9NSE7 274 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RLIMQ9NVW2 624 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 RGL1Q9NZL6 768 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZKSCAN7Q9P0L1 754 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 KIAA1456Q9P272 454 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SUCLA2Q9P2R7 463 aaPredicted RBP-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC17A7Q9P2U7 560 aa-1.66□□□□□ -2.68
RNU4-88P-201ENST00000411220 MSRAQ9UJ68 235 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms