RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FCGR1AP12314 374 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 KRT10P13645 584 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 ZNF12P17014 697 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CYP2B6P20813 491 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SFNP31947 248 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 UBA7P41226 1012 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 COMPP49747 757 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 CLCN5P51795 746 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 EFNA5P52803 228 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 RAD23BP54727 409 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 BNC1Q01954 994 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 MAP2K1Q02750 393 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 PRKCZQ05513 592 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE1Q13065 139 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE4Q13068 117 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 ACVR2BQ13705 512 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 RUNX2Q13950 521 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 NEDD9Q14511 834 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 RNPS1Q15287 305 aaKnown RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 UGCGQ16739 394 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 ZSCAN23Q3MJ62 389 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 DUSP28Q4G0W2 176 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PPP6R3Q5H9R7 873 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 CELF3Q5SZQ8 465 aaKnown RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 KRT79Q5XKE5 535 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 HAUS3Q68CZ6 603 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SEPT14Q6ZU15 432 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CCDC105Q8IYK2 499 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 KIAA2013Q8IYS2 634 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PDILTQ8N807 584 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 IQUBQ8NA54 791 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SPATA20Q8TB22 786 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 WFIKKN2Q8TEU8 576 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SCFD2Q8WU76 684 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 RAD54LQ92698 747 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SYAP1Q96A49 352 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 DHX58Q96C10 678 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CALML4Q96GE6 196 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PPM1MQ96MI6 270 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SLITRK1Q96PX8 696 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PCYT2Q99447 389 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 EIF2AK1Q9BQI3 630 aaKnown RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 SDF4Q9BRK5 362 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 H2AFJQ9BTM1 129 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 NT5C3AQ9H0P0 336 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CUEDC2Q9H467 287 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PLEKHA4Q9H4M7 779 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 MAGEF1Q9HAY2 307 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CYSLTR2Q9NS75 346 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 OR6C3Q9NZP0 311 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 WRAP73Q9P2S5 460 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 SLC9A2Q9UBY0 812 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 NRBP1Q9UHY1 535 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 KCNG2Q9UJ96 466 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 TUBE1Q9UJT0 475 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 PCNTO95613 3336 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SIP14410 1827 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 GSTTP1A0A1W2PQM5 241 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SYCE3A1L190 88 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 E9PMD0 336 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TIMM23O14925 209 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CTAGE5O15320 804 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TNFSF14O43557 240 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CHMP2AO43633 222 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 KLRC4O43908 158 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 KINO60870 393 aaKnown RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 ATP2C2O75185 946 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 GGPS1O95749 300 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TFP02787 698 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 MMP2P08253 660 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SUPT20HL2P0C7V6 817 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CYBAP13498 195 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 POU1F1P28069 291 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ABCD3P28288 659 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 C21orf33P30042 268 aaPredicted RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 ABCD1P33897 745 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CCT6AP40227 531 aaKnown RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 QARSP47897 775 aaKnown RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 SLC12A3P55017 1021 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PSMC5P62195 406 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PSMC6P62333 389 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ARHGAP1Q07960 439 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PNOCQ13519 176 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 TDGQ13569 410 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PLCB4Q15147 1175 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CAMK4Q16566 473 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 HSDL1Q3SXM5 330 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 SGO1Q5FBB7 561 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 FAM69BQ5VUD6 431 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 PLEKHA7Q6IQ23 1121 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ACAD10Q6JQN1 1059 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 MMS22LQ6ZRQ5 1243 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 MIER3Q7Z3K6 550 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ZNF329Q86UD4 541 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 ARMC8Q8IUR7 673 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 LURAP1LQ8IV03 231 aa4.32□□□□□ -1.72
CLK1-203ENST00000409769 CCDC60Q8IWA6 550 aaPredicted RBP4.32□□□□□ -1.72
CLK1-203ENST00000409769 C4orf19Q8IY42 314 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms