RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CPNE3O75131 537 aaKnown RBP14.37□□□□□ -0.11
CBX3-203ENST00000409747 CREG1O75629 220 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 GSTM1P09488 218 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 MC4RP32245 332 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 GSTM4Q03013 218 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 ERV3-1Q14264 604 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 KCNAB1Q14722 419 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 LACTB2Q53H82 288 aaPredicted RBP14.37□□□□□ -0.11
CBX3-203ENST00000409747 ATP1A1-AS1Q5TC04 95 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 PWWP2BQ6NUJ5 590 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 AADACL2Q6P093 401 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
CBX3-203ENST00000409747 CT55Q8WUE5 264 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 ABHD17AQ96GS6 310 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
CBX3-203ENST00000409747 GPR87Q9BY21 358 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 ZDHHC3Q9NYG2 299 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 KCNMB2Q9Y691 235 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 IGLV3-16A0A075B6K0 115 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 MKRN2OSH3BPM6 223 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 PSMD3O43242 534 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 TIAF1O95411 115 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 POLBP06746 335 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 ACRV1P26436 265 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 CASRP41180 1078 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 RPA4Q13156 261 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 SPARCL1Q14515 664 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 ZRANB3Q5FWF4 1079 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 TMEM126BQ8IUX1 230 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 FAM71DQ8N9W8 422 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 RNF31Q96EP0 1072 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 DNAJC1Q96KC8 554 aaKnown RBP14.36□□□□□ -0.11
CBX3-203ENST00000409747 ALS2CR12Q96Q35 445 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 TWSG1Q9GZX9 223 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 COG4Q9H9E3 785 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 ZNF71Q9NQZ8 489 aaPredicted RBP14.36□□□□□ -0.11
CBX3-203ENST00000409747 LATS2Q9NRM7 1088 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 BTRCQ9Y297 605 aa14.36□□□□□ -0.11
CBX3-203ENST00000409747 TRBV5-4A0A0C4DH59 114 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 PIPSLA2A3N6 862 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 MAP3K7O43318 606 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 SCRG1O75711 98 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 CD151P48509 253 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 RPS15P62841 145 aaKnown RBP14.35□□□□□ -0.11
CBX3-203ENST00000409747 STYXQ8WUJ0 223 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 NAT14Q8WUY8 206 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 LCN9Q8WX39 176 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 SRMSQ9H3Y6 488 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 ACTL8Q9H568 366 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 FAM96AQ9H5X1 160 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 MVB12BQ9H7P6 319 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 SYTL2Q9HCH5 934 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 C1GALT1Q9NS00 363 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 NLE1Q9NVX2 485 aaPredicted RBP14.35□□□□□ -0.11
CBX3-203ENST00000409747 POMT2Q9UKY4 750 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 CDC14CA4D256 554 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 QSOX1O00391 747 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 RFPL1O75677 317 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 AP2A2O94973 939 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 AP2A1O95782 977 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 POLR2CP19387 275 aaPredicted RBP14.35□□□□□ -0.11
CBX3-203ENST00000409747 CDH3P22223 829 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
CBX3-203ENST00000409747 PMS2P54278 862 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 CACNG1Q06432 222 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 KLF1Q13351 362 aaPredicted RBP14.35□□□□□ -0.11
CBX3-203ENST00000409747 TAS2R42Q7RTR8 314 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 LINC00523Q86TU6 105 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 SERPINA9Q86WD7 417 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 OR4E2Q8NGC2 313 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 RBSNQ9H1K0 784 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 EPN3Q9H201 632 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 OR52A5Q9H2C5 316 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 MAN2B2Q9Y2E5 1009 aa14.35□□□□□ -0.11
CBX3-203ENST00000409747 GSAPA4D1B5 854 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 GAS8O95995 478 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 NTRK1P04629 796 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 PTPN4P29074 926 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 GSDMDP57764 484 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 POU6F1Q14863 301 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 SKIDA1Q1XH10 827 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 CERS6Q6ZMG9 384 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 SYVN1Q86TM6 617 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 LILRA3Q8N6C8 439 aaPredicted RBP14.34□□□□□ -0.11
CBX3-203ENST00000409747 THAP4Q8WY91 577 aa14.34□□□□□ -0.11
CBX3-203ENST00000409747 ZNF501Q96CX3 271 aaPredicted RBP14.34□□□□□ -0.11
CBX3-203ENST00000409747 ERI2A8K979 691 aaKnown RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 CCL22O00626 93 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 ARHGAP6O43182 974 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 METTL18O95568 372 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 KLK3P07288 261 aaPredicted RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 MSL3P1P0C860 447 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 NSG1P42857 185 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 ARCN1P48444 511 aaKnown RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 KLRB1Q12918 225 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms