RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 IGHV1OR21-1A0A087WYE8 117 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 PRAMEF33A0A0G2JMD5 474 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 KPNA5O15131 536 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 NIPSNAP2O75323 286 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 GPC4O75487 556 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 HAUS5O94927 633 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 MT-CO3P00414 261 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 APOA4P06727 396 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 GSTA2P09210 222 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 ECHS1P30084 290 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 SSTR1P30872 391 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 MAGEA4P43358 317 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 GPLD1P80108 840 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 SHC2P98077 582 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 MGAT5Q09328 741 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CUL1Q13616 776 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 TMED2Q15363 201 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 DUS1LQ6P1R4 473 aaKnown RBP19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CNSTQ6PJW8 725 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 RBM44Q6ZP01 1051 aaKnown RBP19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CAPN12Q6ZSI9 719 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CEP128Q6ZU80 1094 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 DCBLD1Q8N8Z6 715 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 IFT81Q8WYA0 676 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 C9orf72Q96LT7 481 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 GFM1Q96RP9 751 aaKnown RBP19.83■□□□□ 0.77
PTCD3-202ENST00000409326 SCNM1Q9BWG6 230 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CCDC68Q9H2F9 335 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 SLC17A6Q9P2U8 582 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 KLK13Q9UKR3 277 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 CDYLQ9Y232 598 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 HEBP2Q9Y5Z4 205 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 COMMD10Q9Y6G5 202 aa19.83■□□□□ 0.77
PTCD3-202ENST00000409326 KIF26BQ2KJY2 2108 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 FAM221BA6H8Z2 402 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 D6RAR5 112 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 RHOXF2BP0C7M4 288 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 JUPP14923 745 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 CSE1LP55060 971 aaKnown RBP19.82■□□□□ 0.76
PTCD3-202ENST00000409326 HSPA14Q0VDF9 509 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 GPR18Q14330 331 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 CLPPQ16740 277 aaPredicted RBP19.82■□□□□ 0.76
PTCD3-202ENST00000409326 AMZ1Q400G9 498 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 ZNF549Q6P9A3 640 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 OTOAQ7RTW8 1153 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 SLC22A15Q8IZD6 547 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 OR10G6Q8NH81 332 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 DEPDC7Q96QD5 511 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 FMO2Q99518 471 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 RHOXF2Q9BQY4 288 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 EPB41L1Q9H4G0 881 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 LATS2Q9NRM7 1088 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 ZFATQ9P243 1243 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 NEUROG3Q9Y4Z2 214 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 COLEC10Q9Y6Z7 277 aa19.82■□□□□ 0.76
PTCD3-202ENST00000409326 FAM149AA5PLN7 773 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 E5RI56 91 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 DUX1O43812 170 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 SLCO2B1O94956 709 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 CPNE6O95741 557 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 AHSGP02765 367 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 SPINK2P20155 84 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 CHRM3P20309 590 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 ACADLP28330 430 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 NDUFS1P28331 727 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 GABRB3P28472 473 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 CD1CP29017 333 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 PDX1P52945 283 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 GPX6P59796 221 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 SQSTM1Q13501 440 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 MAP9Q49MG5 647 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 PLEKHS1Q5SXH7 462 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 C3orf62Q6ZUJ4 267 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 CYS1Q717R9 158 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 VRK3Q8IV63 474 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 IFT20Q8IY31 132 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 ZFPM2Q8WW38 1151 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 TFGQ92734 400 aaPredicted RBP19.81■□□□□ 0.76
PTCD3-202ENST00000409326 KCNJ9Q92806 393 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 AARSD1Q9BTE6 412 aaKnown RBP19.81■□□□□ 0.76
PTCD3-202ENST00000409326 TBC1D10AQ9BXI6 508 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 TSPYL1Q9H0U9 437 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 LRRC4CQ9HCJ2 640 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 ANGPTL2Q9UKU9 493 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 ATXN7L1Q9ULK2 861 aaPredicted RBP19.81■□□□□ 0.76
PTCD3-202ENST00000409326 MED16Q9Y2X0 877 aa19.81■□□□□ 0.76
PTCD3-202ENST00000409326 TCRBV9S1A1TA0A576 114 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 CLCN7P51798 805 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 FOXK2Q01167 660 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 TARDBPQ13148 414 aaKnown RBP eCLIP19.8■□□□□ 0.76
PTCD3-202ENST00000409326 GBX1Q14549 363 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 NKAIN2Q5VXU1 208 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 CCNI2Q6ZMN8 369 aaPredicted RBP19.8■□□□□ 0.76
PTCD3-202ENST00000409326 SLC26A11Q86WA9 606 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 RELL1Q8IUW5 271 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 FAM136AQ96C01 138 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 AHCYL2Q96HN2 611 aaKnown RBP19.8■□□□□ 0.76
PTCD3-202ENST00000409326 DPYSL5Q9BPU6 564 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 KIR3DX1Q9H7L2 352 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 MVB12BQ9H7P6 319 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms