RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CAPZBP47756 277 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 GFERP55789 205 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 BOP1Q14137 746 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 DHX34Q14147 1143 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ANKRD20A4Q4UJ75 823 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 SYTL3Q4VX76 610 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 TMEM164Q5U3C3 297 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 IZUMO3Q5VZ72 239 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 KIAA0930Q6ICG6 404 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 C19orf48Q6RUI8 117 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 NAPRTQ6XQN6 538 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 SYT10Q6XYQ8 523 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 FAM129CQ86XR2 697 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ZNF669Q96BR6 464 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ZDHHC12Q96GR4 267 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 C9orf72Q96LT7 481 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 FCRL3Q96P31 734 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 TRIM56Q9BRZ2 755 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 TSSK1BQ9BXA7 367 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 KIR3DX1Q9H7L2 352 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 OCIAD1Q9NX40 245 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 SLC24A2Q9UI40 661 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 MN1Q10571 1320 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ZZEF1O43149 2961 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PIKFYVEQ9Y2I7 2098 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 EFCAB7A8K855 629 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PFDN6O15212 129 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 C9P02748 559 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 MAGEA3P43357 314 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 LEPRP48357 1165 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ARCN1P48444 511 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PLOD1Q02809 727 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PTRHD1Q6GMV3 140 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 IRGCQ6NXR0 463 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PDZD3Q86UT5 571 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 HOOK3Q86VS8 718 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 KCNE4Q8WWG9 221 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 TFGQ92734 400 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 SIGLEC10Q96LC7 697 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 TAAR9Q96RI9 348 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 CARD6Q9BX69 1037 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 EPHA6Q9UF33 1036 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 RPS6KL1Q9Y6S9 549 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 UBA6A0AVT1 1052 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 SLC5A10A0PJK1 596 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 IQCF5A8MTL0 148 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 TTI1O43156 1089 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 PRAMEF10O60809 474 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 RASSF9O75901 435 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 IVDP26440 423 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 ITPKBP27987 946 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 CCR7P32248 378 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 CSE1LP55060 971 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 NEPROQ6NW34 567 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 TMEM135Q86UB9 458 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 ART4Q93070 314 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 TCF12Q99081 682 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 KRT12Q99456 494 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 RAB33BQ9H082 229 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 HRASLS2Q9NWW9 162 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 SLC39A1Q9NY26 324 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 GNPTGQ9UJJ9 305 aa17.49■□□□□ 0.39
PDLIM2-206ENST00000409141 DSPP15924 2871 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 OR6C74A6NCV1 312 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 B4E171 279 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 C9orf172C9J069 976 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 KIF1CO43896 1103 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ANKRD34CP0C6C1 535 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 TSPAN7P41732 249 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ABCG1P45844 678 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 HSPA14Q0VDF9 509 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ARMC6Q6NXE6 501 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 FAM92BQ6ZTR7 304 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 LRRC6Q86X45 466 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 SPACA3Q8IXA5 215 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 KRT222Q8N1A0 295 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 AGGF1Q8N302 714 aaeCLIP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ACVR1CQ8NER5 493 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 OR4E2Q8NGC2 313 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ASZ1Q8WWH4 475 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 LCN9Q8WX39 176 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 STAMBPL1Q96FJ0 436 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 TRIM51Q9BSJ1 452 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 B3GNT4Q9C0J1 378 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 P2RY12Q9H244 342 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 MVB12BQ9H7P6 319 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 IL1RAPL1Q9NZN1 696 aa17.48■□□□□ 0.39
PDLIM2-206ENST00000409141 ZCWPW2A0A1B0GU75 182 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 BHMG1C9JSJ3 638 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 RPS3P23396 243 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 SEPHS1P49903 392 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 PRKG2Q13237 762 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 DNAJC21Q5F1R6 531 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 RNF187Q5TA31 235 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms