RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CDH4P55283 916 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 RPS14P62263 151 aaKnown RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 PPP1R8Q12972 351 aaKnown RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 SLC13A2Q13183 592 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GTF2H2Q13888 395 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GCNT6Q5T4J0 391 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 GTF2H2CQ6P1K8 395 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 SLITRK4Q8IW52 837 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 ZDHHC14Q8IZN3 488 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 OR4K2Q8NGD2 314 aa17.42■□□□□ 0.38
SMPD4-202ENST00000409031 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-202ENST00000409031 OR14I1A6ND48 311 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 MAGEB17A8MXT2 336 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 PLD2O14939 933 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 PAGE1O75459 146 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ASPAP45381 313 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 DPY19L1Q2PZI1 675 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 BTBD16Q32M84 506 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 USP45Q70EL2 814 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 GPR156Q8NFN8 814 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 MALT1Q9UDY8 824 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 IFT52Q9Y366 437 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 CLDN5O00501 218 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 NDST3O95803 873 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 MSL3P1P0C860 447 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 OPRL1P41146 370 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 KLHL22Q53GT1 634 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 DOK6Q6PKX4 331 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 GTPBP3Q969Y2 492 aaKnown RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 MOCS1Q9NZB8 636 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 OR5F1O95221 314 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF806P0C7X5 589 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 NTSP30990 170 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 SRSF11Q05519 484 aaKnown RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 SPAG16Q8N0X2 631 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 OR10G2Q8NGC3 310 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 SPPL2BQ8TCT7 592 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 FCRL5Q96RD9 977 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ZSCAN5AQ9BUG6 496 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 SOX17Q9H6I2 414 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 KCNE2Q9Y6J6 123 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 PER2O15055 1255 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 OR2B3O76000 313 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 IGSF6O95976 241 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF24P17028 368 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 CBLBQ13191 982 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 KIAA1614Q5VZ46 1190 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 CERS6Q6ZMG9 384 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ZCCHC2Q9C0B9 1178 aaKnown RBP17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ITM2BQ9Y287 266 aa17.41■□□□□ 0.38
SMPD4-202ENST00000409031 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 A8MV72 311 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 APOL3O95236 402 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ECDO95905 644 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ITGB1P05556 798 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ARF4P18085 180 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SCNN1AP37088 669 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 RFTN2Q52LD8 501 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 Q6ZNX1 250 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SYVN1Q86TM6 617 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ANKRD46Q86W74 232 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 AKAP1Q92667 903 aaKnown RBP eCLIP17.4■□□□□ 0.382e-7■■■■□ 20
SMPD4-202ENST00000409031 TMEM74Q96NL1 305 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SEZ6LQ9BYH1 1024 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ITM2CQ9NQX7 267 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ZSCAN32Q9NX65 697 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 MID1O15344 667 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 VARSP26640 1264 aaKnown RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 CCR10P46092 362 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SMARCB1Q12824 385 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 MOSPD2Q8NHP6 518 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 USP7Q93009 1102 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 RFKQ969G6 155 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 NPLQ9BXD5 320 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 RACGAP1Q9H0H5 632 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 DSN1Q9H410 356 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SACM1LQ9NTJ5 587 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 SLC25A13Q9UJS0 675 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ENTPD4Q9Y227 616 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 TCAF2A6NFQ2 919 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 C12orf71A8MTZ7 269 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 AP3D1O14617 1153 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 RPLP2P05387 115 aaKnown RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 GTF2E2P29084 291 aaKnown RBP17.4■□□□□ 0.38
SMPD4-202ENST00000409031 ARMC1Q9NVT9 282 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 NCKAP1Q9Y2A7 1128 aa17.4■□□□□ 0.38
SMPD4-202ENST00000409031 CCNDBP1O95273 360 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 CRYZL1O95825 349 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 RPS3P23396 243 aaKnown RBP eCLIP17.39■□□□□ 0.38
SMPD4-202ENST00000409031 OMPP47874 163 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms