RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SLC9A3P48764 834 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPATQ06203 517 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 UBE2V1Q13404 147 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 IDI1Q13907 227 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 HNF4GQ14541 408 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 TWIST1Q15672 202 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 VWC2Q2TAL6 325 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF626Q68DY1 528 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 RGMBQ6NW40 437 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 CCNI2Q6ZMN8 369 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 FOXRED2Q8IWF2 684 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 MOSPD2Q8NHP6 518 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 C9orf43Q8TAL5 461 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZG16BQ96DA0 208 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 MTERF3Q96E29 417 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 HES6Q96HZ4 224 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 CCDC43Q96MW1 224 aaKnown RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR6C1Q96RD1 312 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 MLPHQ9BV36 600 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 SF3B5Q9BWJ5 86 aaKnown RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 HHATLQ9HCP6 504 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 LEF1Q9UJU2 399 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 TINAGQ9UJW2 476 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 CENPJQ9HC77 1338 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 NOS1P29475 1434 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ARHGAP31Q2M1Z3 1444 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 KIDINS220Q9ULH0 1771 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 FRMPD1Q5SYB0 1578 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 UGGT1Q9NYU2 1555 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 A0A0U1RQJ8 604 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 hDV102S1A0JD36 115 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR6C76A6NM76 312 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 CLDN4O14493 209 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 DVL1O14640 695 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 IFIT3O14879 490 aaKnown RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 RFPL2O75678 378 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 CDC25CP30307 473 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ASCL1P50553 236 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 PDE1BQ01064 536 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 TUBB2AQ13885 445 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 MORF4L2Q15014 288 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 E2F5Q15329 346 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 KRTCAP3Q53RY4 240 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC10A5Q5PT55 438 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 C6orf136Q5SQH8 315 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 C8orf82Q6P1X6 216 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 COLCA1Q6ZS62 124 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZBTB49Q6ZSB9 765 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 RAPH1Q70E73 1250 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPATA21Q7Z572 469 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPATA19Q7Z5L4 167 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SIX6OS1Q8N1H7 587 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 C1orf52Q8N6N3 182 aaKnown RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF713Q8N859 430 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPFIBP2Q8ND30 876 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 GRK7Q8WTQ7 553 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 KCNE4Q8WWG9 221 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 EXT2Q93063 718 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 RPL36ALQ969Q0 106 aaKnown RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPSB1Q96BD6 273 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SFXN2Q96NB2 322 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 CAMK1GQ96NX5 476 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR1F2PQ96R84 312 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC22A12Q96S37 553 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 MTERF1Q99551 399 aaKnown RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 GFI1Q99684 422 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC25A33Q9BSK2 321 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 TUBB2BQ9BVA1 445 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 DCLK3Q9C098 648 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZBTB40Q9NUA8 1239 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRMT7Q9NVM4 692 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SNX7Q9UNH6 387 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 AMDHD2Q9Y303 409 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 SNX5Q9Y5X3 404 aa4.63□□□□□ -1.67
HMGB3P18-201ENST00000406327 ABCC3O15438 1527 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZMYM4Q5VZL5 1548 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CFAP74Q9C0B2 1584 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 RNF17Q9BXT8 1623 aaKnown RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 A0A0U1RQK1 487 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF320A2RRD8 509 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ANKUB1A6NFN9 424 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 BECN2A8MW95 431 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ANKRD66B4E2M5 251 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SOCS2O14508 198 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 RGS14O43566 566 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPRY1O43609 319 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 RAB40ALP0C0E4 278 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 DANCRP0C864 163 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PDGFRAP16234 1089 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 NAGLUP54802 743 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 CLDN20P56880 219 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SSBP2P81877 361 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 YWHAHQ04917 246 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRKCZQ05513 592 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 ACSM1Q08AH1 577 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 TRAF1Q13077 416 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 PLA2G7Q13093 441 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 GPS2Q13227 327 aa4.62□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLMAPQ14BN4 828 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms