RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SNHG28P0DPA3 235 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 FCGR1AP12314 374 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SRCP12931 536 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 HIST1H2ADP20671 130 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TNFRSF8P28908 595 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 HOXA13P31271 388 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 EIF2DP41214 584 aaKnown RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 MSH2P43246 934 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 THBS3P49746 956 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SUOXP51687 545 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 CLCNKAP51800 687 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 GPR143P51810 404 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SREBF2Q12772 1141 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZNF155Q12901 538 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TRAF2Q12933 501 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 STK4Q13043 487 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 FHL1Q13642 323 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 DLG2Q15700 870 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 FRG2Q64ET8 278 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 HIST3H2AQ7L7L0 130 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SCYL3Q8IZE3 742 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 POC5Q8NA72 575 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 KBTBD3Q8NAB2 608 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TRPC4APQ8TEL6 797 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TANKQ92844 425 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 OR1F2PQ96R84 312 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 MTERF1Q99551 399 aaKnown RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TMEM204Q9BSN7 226 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 WACQ9BTA9 647 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 BOLA2Q9H3K6 86 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 HRH4Q9H3N8 390 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 PDE7BQ9NP56 450 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 POLLQ9UGP5 575 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 TMEM5Q9Y2B1 443 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 PTRH2Q9Y3E5 179 aaKnown RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 RABGAP1Q9Y3P9 1069 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 LOXL2Q9Y4K0 774 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 NFS1Q9Y697 457 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 FAM205AQ6ZU69 1335 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SALL1Q9NSC2 1324 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 LAMA4Q16363 1823 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 MYH1P12882 1939 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 MYH8P13535 1937 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 BAZ2AQ9UIF9 1905 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 OR2A25A4D2G3 310 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 EIF4E1BA6NMX2 242 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 LACTBL1A8MY62 500 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 INSIG1O15503 277 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 RFPL2O75678 378 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE7O76087 117 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZFYP08048 801 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 LINC00271P0C7V0 271 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 MMP9P14780 707 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 AKR1B1P15121 316 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 RRM1P23921 792 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CHMLP26374 656 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CORO1AP31146 461 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 RAD52P43351 418 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GYG1P46976 350 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 NRIP1P48552 1158 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 FOXG1P55316 489 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 MRPS5P82675 430 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ECT2LQ008S8 904 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SPOCK1Q08629 439 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 LRMPQ12912 555 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE1Q13065 139 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GAGE4Q13068 117 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 MAD2L1Q13257 205 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CALCRLQ16602 461 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 DECR1Q16698 335 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZSCAN25Q6NSZ9 544 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CASC1Q6TDU7 716 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CCDC190Q86UF4 302 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GLCCI1Q86VQ1 547 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SPATA2LQ8IUW3 424 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ADHFE1Q8IWW8 467 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ODF3L1Q8IXM7 274 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SAMD14Q8IZD0 417 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SCML4Q8N228 414 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 RASGEF1CQ8N431 466 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 IL17RCQ8NAC3 791 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 OR5R1Q8NH85 324 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 COA1Q9GZY4 146 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 CD209Q9NNX6 404 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 ANKEF1Q9NU02 776 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 WSB2Q9NYS7 404 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 HMG20BQ9P0W2 317 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 WNT16Q9UBV4 365 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SEC63Q9UGP8 760 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 PADI1Q9ULC6 663 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 KLHL20Q9Y2M5 609 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 SNX8Q9Y5X2 465 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 RAD50Q92878 1312 aa4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 GOLGB1Q14789 3259 aaKnown RBP4.87□□□□□ -1.63
HMGB3P19-201ENST00000403971 KANSL1LA0AUZ9 987 aa4.86□□□□□ -1.63
HMGB3P19-201ENST00000403971 SMAD9O15198 467 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms