RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 FAM159BA6NKW6 160 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 E5RI56 91 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 C1QAP02745 245 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 RPLP0P05388 317 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 FAM153BP0C7A2 387 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CD151P48509 253 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 FOXC1Q12948 553 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 AMZ1Q400G9 498 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 FAM153CQ494X1 144 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NKAIN2Q5VXU1 208 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GALNT7Q86SF2 657 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GSPT2Q8IYD1 628 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SIDT2Q8NBJ9 832 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SH3KBP1Q96B97 665 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 FERD3LQ96RJ6 166 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SLC30A3Q99726 388 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TBC1D10AQ9BXI6 508 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CDC42EP4Q9H3Q1 356 aaKnown RBP16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 LRRN3Q9H3W5 708 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KCNK4Q9NYG8 393 aa16.79■□□□□ 0.28
PTCHD3P3-201ENST00000403073 IFRD1O00458 451 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KPNA5O15131 536 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SLCO2B1O94956 709 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CDK4P11802 303 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ACADLP28330 430 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GPR3P46089 330 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CLCN7P51798 805 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PLOD1Q02809 727 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ABRQ12979 859 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GPR18Q14330 331 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KRT33BQ14525 404 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NR1D2Q14995 579 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TMED2Q15363 201 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TMEM26Q6ZUK4 368 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 USP53Q70EK8 1073 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 RAB44Q7Z6P3 723 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PDZD3Q86UT5 571 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SLC26A11Q86WA9 606 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CTAGE3PQ8IX95 158 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SLC22A15Q8IZD6 547 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ZBTB2Q8N680 514 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 AVL9Q8NBF6 648 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 JPH3Q8WXH2 748 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CDKL2Q92772 493 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ATXN7L3BQ96GX2 97 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GPR21Q99679 349 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 POT1Q9NUX5 634 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TSR3Q9UJK0 312 aaKnown RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 COMMD10Q9Y6G5 202 aa16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
PTCHD3P3-201ENST00000403073 IGHV1OR21-1A0A087WYE8 117 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 HYAL3O43820 417 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SPAG6O75602 509 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ACSL3O95573 720 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 MYBL2P10244 700 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CD1CP29017 333 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 STX2P32856 288 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 MAPK9P45984 424 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CDKN2DP55273 166 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TIAL1Q01085 375 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 EFTUD2Q15029 972 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ACSBG2Q5FVE4 666 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PLEKHS1Q5SXH7 462 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 HECTD2Q5U5R9 776 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 MARCH9Q86YJ5 346 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PPM1NQ8N819 430 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GPATCH11Q8N954 259 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ACVR1CQ8NER5 493 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 CFAP61Q8NHU2 1237 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GIMAP7Q8NHV1 300 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KCNJ9Q92806 393 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ATXN7L1Q9ULK2 861 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 COLEC10Q9Y6Z7 277 aa16.77■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ARID1BQ8NFD5 2236 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 FAM149AA5PLN7 773 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 NTN3O00634 580 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 VPS26AO75436 327 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 MT-CO3P00414 261 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 PPM1FP49593 454 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 PGGT1BP53609 377 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 TUBB4BP68371 445 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 PRKG2Q13237 762 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 SLMAPQ14BN4 828 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 HES3Q5TGS1 186 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 CDCP2Q5VXM1 449 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 CCNI2Q6ZMN8 369 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 PIM3Q86V86 326 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 RBM12BQ8IXT5 1001 aaKnown RBP16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 OR5AR1Q8NGP9 310 aa16.76■□□□□ 0.27
PTCHD3P3-201ENST00000403073 SKA2Q8WVK7 121 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms