RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CYTH2Q99418 400 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GPR21Q99679 349 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GPR22Q99680 433 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CPNE1Q99829 537 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DHRS4Q9BTZ2 278 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SARS2Q9NP81 518 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NSMCE4AQ9NXX6 385 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DLL3Q9NYJ7 618 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CDV3Q9UKY7 258 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CORO1CQ9ULV4 474 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DHRS7Q9Y394 339 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CFAP20Q9Y6A4 193 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 COMMD10Q9Y6G5 202 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RP1P56715 2156 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 A0A087WUV0 522 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FAM95CA0A1B0GW59 222 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PPM1DO15297 605 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CTIFO43310 598 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SHBGP04278 402 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CKMT2P17540 419 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CHRM3P20309 590 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CD9P21926 228 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 HSD17B3P37058 310 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FASLGP48023 281 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ACADVLP49748 655 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CSRP3P50461 194 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TAS2R39P59534 338 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 HSPA14Q0VDF9 509 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZNF460Q14592 562 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SYTL3Q4VX76 610 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PLEKHS1Q5SXH7 462 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FAM45BPQ6NSW5 357 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 EMBQ6PCB8 327 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZNF438Q7Z4V0 828 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GLRX5Q86SX6 157 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RASGRP3Q8IV61 690 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CEP97Q8IW35 865 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DCAKDQ8WVC6 231 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MRRFQ96E11 262 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ELMO2Q96JJ3 720 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PAFAH2Q99487 392 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CAB39LQ9H9S4 337 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KLHL42Q9P2K6 505 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 FTSJ1Q9UET6 329 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PADI4Q9UM07 663 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DCHS1Q96JQ0 3298 aa12.13□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KIR2DS5A0A0G2JLQ3 304 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 A0A0G2JNG1 304 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 F8W8V4 182 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KIR2DS3K7RE56 304 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TNFSF14O43557 240 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TSPAN12O95859 305 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 APOA4P06727 396 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ITGA2BP08514 1039 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MTHFD1P11586 935 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 XRCC1P18887 633 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ACP1P24666 158 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MCM3P25205 808 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GMPRP36959 345 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 BMPR2Q13873 1038 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NR1D2Q14995 579 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NR0B2Q15466 257 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 PAQR3Q6TCH7 311 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CYHR1Q6ZMK1 362 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CPNE9Q8IYJ1 553 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MREGQ8N565 214 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 ZBTB2Q8N680 514 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 MAPK15Q8TD08 544 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NRTNQ99748 197 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 IMP3Q9NV31 184 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CPNE7Q9UBL6 633 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 VWA7Q9Y334 891 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 CNOT1A5YKK6 2376 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SPEGQ15772 3267 aa12.12□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 OR5K4A6NMS3 321 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 E5RI56 91 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 NUDT21O43809 227 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 VPS26AO75436 327 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 DKK1O94907 266 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 TPBGLP0DKB5 382 aa12.11□□□□□ -0.47
HLA-DQB1-203ENST00000399082 SLC2A4P14672 509 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms