RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CENPEQ02224 2701 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 OR5K3A6NET4 321 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
VCX3A-202ENST00000398729 DLGAP3O95886 979 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SFTPCP11686 197 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 NELFEP18615 380 aaKnown RBP13.08□□□□□ -0.32
VCX3A-202ENST00000398729 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
VCX3A-202ENST00000398729 PPP1CAP62136 330 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 TLE1Q04724 770 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SNX1Q13596 522 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 MAP7Q14244 749 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 CAPRIN2Q6IMN6 1127 aaKnown RBP13.08□□□□□ -0.32
VCX3A-202ENST00000398729 ARMC6Q6NXE6 501 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 PPP1R21Q6ZMI0 780 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 ZNF662Q6ZS27 426 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 RASGRP3Q8IV61 690 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 ESX1Q8N693 406 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 CCDC89Q8N998 374 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 OR52K1Q8NGK4 314 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SLC12A9Q9BXP2 914 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SLC25A18Q9H1K4 315 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 KIR3DX1Q9H7L2 352 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 COG4Q9H9E3 785 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 HRASLS2Q9NWW9 162 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 GEMIN8Q9NWZ8 242 aaKnown RBP13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SEMA5BQ9P283 1151 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 SLC24A2Q9UI40 661 aa13.08□□□□□ -0.32
VCX3A-202ENST00000398729 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 LOC101059948A0A1B0GTJ6 334 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 UBA6A0AVT1 1052 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 CCDC78A2IDD5 438 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 SUN1O94901 812 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 AP2A2O94973 939 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 GSTM1P09488 218 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 FGF5P12034 268 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 PSMA3P25788 255 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 ARL4DP49703 201 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 GSTM4Q03013 218 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 RPA4Q13156 261 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 CCNG2Q16589 344 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 DBN1Q16643 649 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 PPP1R3BQ86XI6 285 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 KMT5CQ86Y97 462 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 LILRA3Q8N6C8 439 aaPredicted RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 SIDT2Q8NBJ9 832 aaKnown RBP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.07□□□□□ -0.32
VCX3A-202ENST00000398729 ELMO2Q96JJ3 720 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 SLC41A2Q96JW4 573 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 MAP3K3Q99759 626 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 PDE7BQ9NP56 450 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 RAB6BQ9NRW1 208 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 SMARCAL1Q9NZC9 954 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 PAK5Q9P286 719 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 ITPR2Q14571 2701 aa13.07□□□□□ -0.32
VCX3A-202ENST00000398729 HEATR9A2RTY3 570 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CLEC18AA5D8T8 446 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 QSOX1O00391 747 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 NRDCO43847 1150 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 APRTP07741 180 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ETS1P14921 441 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ZNF28P17035 718 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 STAT5AP42229 794 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 NSG1P42857 185 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CD151P48509 253 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ACY1Q03154 408 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 TUBB3Q13509 450 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 SEMA5AQ13591 1074 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ITIH4Q14624 930 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
VCX3A-202ENST00000398729 C6orf15Q6UXA7 325 aaPredicted RBP13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CLEC18BQ6UXF7 455 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 BPHLQ86WA6 291 aaPredicted RBP13.06□□□□□ -0.32
VCX3A-202ENST00000398729 LRRC8AQ8IWT6 810 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 PIANPQ8IYJ0 282 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CLDN19Q8N6F1 224 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CLEC18CQ8NCF0 446 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ACVR1CQ8NER5 493 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 TRIM58Q8NG06 486 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 STAMBPL1Q96FJ0 436 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CATSPER2Q96P56 530 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 FERD3LQ96RJ6 166 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms