RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 OPA1O60313 960 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 APOA4P06727 396 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 MTHFD1P11586 935 aaKnown RBP24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 RBM20Q5T481 1227 aaKnown RBP24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 CEP128Q6ZU80 1094 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 ZNF438Q7Z4V0 828 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 SPRED1Q7Z699 444 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 ASZ1Q8WWH4 475 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 SLC38A3Q99624 504 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 SLC40A1Q9NP59 571 aa24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 TSR3Q9UJK0 312 aaKnown RBP24.79■■□□□ 1.56
TMEM55B-202ENST00000398020 IFRD1O00458 451 aaPredicted RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 GPC4O75487 556 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 RPLP0P05388 317 aaKnown RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 FAM153BP0C7A2 387 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 MYBL2P10244 700 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 PNLIPP16233 465 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 CD151P48509 253 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 CCL7P80098 99 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 TMED2Q15363 201 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 KBTBD12Q3ZCT8 623 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 AMZ1Q400G9 498 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 FAM153CQ494X1 144 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 PDZD3Q86UT5 571 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 CHCHD4Q8N4Q1 142 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 SIDT2Q8NBJ9 832 aaKnown RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 SLC30A3Q99726 388 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 AARSD1Q9BTE6 412 aaKnown RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 POT1Q9NUX5 634 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 FAM159BA6NKW6 160 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 B4GAT1O43505 415 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 TOP3BO95985 862 aaKnown RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 C1QAP02745 245 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 INSM1Q01101 510 aaPredicted RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 FOXC1Q12948 553 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 GPR18Q14330 331 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 EFTUD2Q15029 972 aaKnown RBP eCLIP24.78■■□□□ 1.564e-7■■■■■ 39.8
TMEM55B-202ENST00000398020 RELL1Q8IUW5 271 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 CTAGE3PQ8IX95 158 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 PHC3Q8NDX5 983 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 JPH3Q8WXH2 748 aaPredicted RBP24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 ADAMTS14Q8WXS8 1223 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 CDKL2Q92772 493 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 TBC1D10AQ9BXI6 508 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 KCNK4Q9NYG8 393 aa24.78■■□□□ 1.56
TMEM55B-202ENST00000398020 A0A1W2PQM1 296 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 ACSL3O95573 720 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 PPM1FP49593 454 aaPredicted RBP24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 CLCN7P51798 805 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 E2F1Q01094 437 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 NKAIN2Q5VXU1 208 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 GALNT7Q86SF2 657 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 SLC26A11Q86WA9 606 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 SLC22A15Q8IZD6 547 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 GPATCH11Q8N954 259 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 GIMAP7Q8NHV1 300 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 KCNJ9Q92806 393 aa24.77■■□□□ 1.56
TMEM55B-202ENST00000398020 SPAG6O75602 509 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 STX2P32856 288 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 MAPK9P45984 424 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 PGGT1BP53609 377 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 PLOD1Q02809 727 aaPredicted RBP24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 KRT33BQ14525 404 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 NR1D2Q14995 579 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 TMEM26Q6ZUK4 368 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 CYS1Q717R9 158 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 ZBTB2Q8N680 514 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 AVL9Q8NBF6 648 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 TFGQ92734 400 aaPredicted RBP24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 FERD3LQ96RJ6 166 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 GPR21Q99679 349 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 ATXN7L1Q9ULK2 861 aaPredicted RBP24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 COMMD10Q9Y6G5 202 aa24.76■■□□□ 1.55
TMEM55B-202ENST00000398020 KPNA5O15131 536 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 SLCO2B1O94956 709 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 ACADLP28330 430 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 GPR3P46089 330 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 CDKN2DP55273 166 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 ABRQ12979 859 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 HES3Q5TGS1 186 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 PIM3Q86V86 326 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 ZC3HC1Q86WB0 502 aaKnown RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 MARCH9Q86YJ5 346 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 PPM1NQ8N819 430 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 ACVR1CQ8NER5 493 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 SKA2Q8WVK7 121 aaPredicted RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 SH3KBP1Q96B97 665 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 LRRN3Q9H3W5 708 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 RDH14Q9HBH5 336 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 RUVBL2Q9Y230 463 aaKnown RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 IGHV1OR21-1A0A087WYE8 117 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 HYAL3O43820 417 aaPredicted RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 TIAL1Q01085 375 aaKnown RBP eCLIP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 PLEKHS1Q5SXH7 462 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 USP53Q70EK8 1073 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 RAB44Q7Z6P3 723 aaPredicted RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 OR5AR1Q8NGP9 310 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 CFAP61Q8NHU2 1237 aa24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.75■■□□□ 1.55
TMEM55B-202ENST00000398020 NSMCE4AQ9NXX6 385 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms