RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SUPT3HO75486 399 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 IGHV4-34P06331 123 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 ANXA5P08758 320 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 AOC1P19801 751 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 PIK3CGP48736 1102 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 CLCNKAP51800 687 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 NAGLUP54802 743 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 PRKAA1Q13131 559 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 NUMA1Q14980 2115 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 UNC5DQ6UXZ4 953 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 PIGWQ7Z7B1 504 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 C11orf96Q7Z7L8 435 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 SPATS2Q86XZ4 545 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 RASGRP3Q8IV61 690 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 ZNF547Q8IVP9 402 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 OR56A4Q8NGH8 313 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 STON2Q8WXE9 905 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 FAR2Q96K12 515 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 GATA5Q9BWX5 397 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 ILKAPQ9H0C8 392 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 CD274Q9NZQ7 290 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 KLHL14Q9P2G3 628 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 OR1A2Q9Y585 309 aa18.65■□□□□ 0.58
TSPAN4-204ENST00000397404 PSIP1O75475 530 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 MLYCDO95822 493 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 THOP1P52888 689 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 PPARDQ03181 441 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 PCBP2Q15366 365 aaKnown RBP eCLIP18.64■□□□□ 0.573e-6■■■■□ 22.3
TSPAN4-204ENST00000397404 ZNF678Q5SXM1 525 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 PIWIL2Q8TC59 973 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 UBTD2Q8WUN7 234 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 KLK6Q92876 244 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 LGR4Q9BXB1 951 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 GPR174Q9BXC1 333 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 C6orf106Q9H6K1 298 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 DLGAP2Q9P1A6 1054 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 RAP2CQ9Y3L5 183 aa18.64■□□□□ 0.57
TSPAN4-204ENST00000397404 METTL12A8MUP2 240 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 SNX3O60493 162 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 HSPA4LO95757 839 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 CEACAM5P06731 702 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 CD27P26842 260 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 GMPRP36959 345 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 RPIAP49247 311 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 SETDB1Q15047 1291 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 PFKFB4Q16877 469 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 ZNF648Q5T619 568 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 METRNLQ641Q3 311 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 ANKS6Q68DC2 871 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 FRMD7Q6ZUT3 714 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 UBE2R2Q712K3 238 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 TRIM74Q86UV6 250 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 CFAP206Q8IYR0 622 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 PTGR2Q8N8N7 351 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 ZNF473Q8WTR7 871 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 SKA2Q8WVK7 121 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 SKA1Q96BD8 255 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 BIRC7Q96CA5 298 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 VTI1BQ9UEU0 232 aa18.63■□□□□ 0.57
TSPAN4-204ENST00000397404 K7ESF4 209 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 UBXN8O00124 270 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 IFRD1O00458 451 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 FSBPO95073 299 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 GGT5P36269 586 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 KCNC1P48547 511 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 BLKP51451 505 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 GCNT7Q6ZNI0 430 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 FAM47EQ6ZV65 393 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 SPATA21Q7Z572 469 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 PHF21BQ96EK2 531 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 BMFQ96LC9 184 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 MAGEB10Q96LZ2 347 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 CCDC138Q96M89 665 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 TMEM237Q96Q45 408 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 SLCO1B3Q9NPD5 702 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 TRNAU1APQ9NX07 287 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 ZNHIT2Q9UHR6 403 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 MBD1Q9UIS9 605 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 TMEM98Q9Y2Y6 226 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 DGKBQ9Y6T7 804 aa18.62■□□□□ 0.57
TSPAN4-204ENST00000397404 PRSS38A1L453 326 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 KDM1AO60341 852 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 RPS17P08708 135 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 HSD17B2P37059 387 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 PYCR3Q53H96 274 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 CWF19L1Q69YN2 538 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 DOK6Q6PKX4 331 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 PDZD3Q86UT5 571 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 CACNA2D3Q8IZS8 1091 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 UNKQ9C0B0 810 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 CD93Q9NPY3 652 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 PRMT8Q9NR22 394 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 GPR27Q9NS67 375 aa18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 PTBP2Q9UKA9 531 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-204ENST00000397404 POM121BA6NF01 834 aa18.6■□□□□ 0.57
TSPAN4-204ENST00000397404 ZNF839A8K0R7 811 aa18.6■□□□□ 0.57
TSPAN4-204ENST00000397404 GIPC1O14908 333 aa18.6■□□□□ 0.57
TSPAN4-204ENST00000397404 KATNA1O75449 491 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms