RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SAP25Q8TEE9 199 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 WWP1Q9H0M0 922 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 SYTL2Q9HCH5 934 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 RIF1Q5UIP0 2472 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 NEMP2A6NFY4 417 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 FFAR2O15552 330 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 SLC35G4P0C7Q5 338 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 TGM1P22735 817 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 RGS4P49798 205 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 DEFB133Q30KQ1 61 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 TMEM207Q6UWW9 146 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 KANSL1Q7Z3B3 1105 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 SLC22A15Q8IZD6 547 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 MZB1Q8WU39 189 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 ISL2Q96A47 359 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 EDEM2Q9BV94 578 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 OR52A5Q9H2C5 316 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 CENPHQ9H3R5 247 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 DPEP2Q9H4A9 486 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 VIPAS39Q9H9C1 493 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 TLK1Q9UKI8 766 aa23.1■■□□□ 1.29
TSPAN4-203ENST00000397397 FRYLO94915 3013 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 EML2O95834 649 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 MT-ND3P03897 115 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 C2P06681 752 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 CBSLP0DN79 551 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 ZNF37AP17032 561 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 CBSP35520 551 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 MAGEA12P43365 314 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 IL2P60568 153 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 TAF1BQ53T94 588 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 AGAP9Q5VTM2 703 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 LVRNQ6Q4G3 990 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 WASH2PQ6VEQ5 465 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 PRR23CQ6ZRP0 262 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 EEF1AKMT1Q8WVE0 214 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 SKA2Q8WVK7 121 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 LINGO1Q96FE5 620 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 WASH6PQ9NQA3 447 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 WDR37Q9Y2I8 494 aa23.09■■□□□ 1.29
TSPAN4-203ENST00000397397 A0A096LPK6 155 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 FOXO6A8MYZ6 492 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 B4DGG1 531 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 DYNC1I1O14576 645 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 RGS16O15492 202 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 RFPL1O75677 317 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 WISP3O95389 354 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 MPOP05164 745 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ZNF883P0CG24 379 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 SLC35E2BP0CK96 405 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ENO3P13929 434 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ATP5DP30049 168 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 HALP42357 657 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 UAP1L1Q3KQV9 507 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 AASDHQ4L235 1098 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 PPM1JQ5JR12 505 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 PDZD3Q86UT5 571 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 NKAPQ8N5F7 415 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ZDHHC1Q8WTX9 485 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ANKRD49Q8WVL7 239 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 RMDN2Q96LZ7 410 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 VPS11Q9H270 941 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 DNAAF2Q9NVR5 837 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 PCOLCE2Q9UKZ9 415 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 ACOT9Q9Y305 439 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 CFAP54Q96N23 3096 aa23.08■■□□□ 1.29
TSPAN4-203ENST00000397397 PTPRZ1P23471 2315 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 A0A087X1B8 175 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 A0A1W2PPM1 405 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 EIF3FO00303 357 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 IFRD1O00458 451 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 PCDHGA12O60330 932 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 F3P13726 295 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 BRAFP15056 766 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 GMPRP36959 345 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 CSRP3P50461 194 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 ABRQ12979 859 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 CLCA4Q14CN2 919 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 CAPRIN2Q6IMN6 1127 aaKnown RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 ABRAXAS1Q6UWZ7 409 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 CCDC91Q7Z6B0 441 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 SPDYE1Q8NFV5 336 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 TMEM9BQ9NQ34 198 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 RXFP3Q9NSD7 469 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 ZNF446Q9NWS9 450 aa23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 SCHIP1Q9P0W5 487 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-203ENST00000397397 ARHGEF17Q96PE2 2063 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 TRBV23OR9-2A0A075B6M9 112 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 A6NCN8 305 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 GOLGA6L10A6NI86 522 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 CDX4O14627 284 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 MAP2K7O14733 419 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 MYZAPP0CAP1 466 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 CCDC166P0CW27 439 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 MPC1LP0DKB6 136 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 SLC2A4P14672 509 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 SUZ12Q15022 739 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 LRRC8EQ6NSJ5 796 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 NEK10Q6ZWH5 1172 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 PIWIL4Q7Z3Z4 852 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms