RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TMPRSS11EQ9UL52 423 aa9.16□□□□□ -0.94
NEDD9-203ENST00000397378 PADI2Q9Y2J8 665 aa9.16□□□□□ -0.94
NEDD9-203ENST00000397378 LRRC10BA6NIK2 292 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 MASP2O00187 686 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 LDB2O43679 373 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 IGHEP01854 428 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 HADHAP40939 763 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 CD86P42081 329 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 CA7P43166 264 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 ARCN1P48444 511 aaKnown RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 ARSEP51690 589 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 SMSP52788 366 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 CSNK1G2P78368 415 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 GALNT3Q14435 633 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 KRT81Q14533 505 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 NCF4Q15080 339 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 PRAMEF17Q5VTA0 474 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 B3GNTL1Q67FW5 361 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 FAAH2Q6GMR7 532 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 SPOCD1Q6ZMY3 1216 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 MEX3BQ6ZN04 569 aaKnown RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 TMEM200AQ86VY9 491 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 AMZ2Q86W34 360 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 OOSP2Q86WS3 158 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 PRIMA1Q86XR5 153 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 COG1Q8WTW3 980 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 SRPK1Q96SB4 655 aaKnown RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 SPOCK3Q9BQ16 436 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 DHRS4Q9BTZ2 278 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 PCMTD2Q9NV79 361 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 FANCLQ9NW38 375 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 SHOC2Q9UQ13 582 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF711Q9Y462 761 aa9.15□□□□□ -0.94
NEDD9-203ENST00000397378 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-203ENST00000397378 PRRC2AP48634 2157 aaKnown RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 C9J4A7 227 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 PCDH17O14917 1159 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 KLF7O75840 302 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CLDN14O95500 239 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CD48P09326 243 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ESRRAP11474 423 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 MTHFD1P11586 935 aaKnown RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 MX2P20592 715 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 DNAJA1P31689 397 aaKnown RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 PRKCIP41743 596 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 TDGF1P3P51864 188 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 KPNA2P52292 529 aaKnown RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 SOX8P57073 446 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ADORA2A-AS1P86434 159 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ADCY2Q08462 1091 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 GTF2H3Q13889 308 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 SSPNQ14714 243 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 PRKD1Q15139 912 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 TLR1Q15399 786 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CDSNQ15517 529 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ATP13A5Q4VNC0 1218 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF789Q5FWF6 425 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF385CQ66K41 422 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ARMC6Q6NXE6 501 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF571Q7Z3V5 609 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CNTD1Q8N815 330 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 DTX3LQ8TDB6 740 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 FOXC2Q99958 501 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 GPR63Q9BZJ6 419 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 SLC7A5P2Q9GIP4 190 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ISCUQ9H1K1 167 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 NUP62CLQ9H1M0 184 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CXXC4Q9H2H0 198 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 HAUS4Q9H6D7 363 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ACTR5Q9H9F9 607 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-203ENST00000397378 C1GALT1Q9NS00 363 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 SOHLH2Q9NX45 425 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 MYO1AQ9UBC5 1043 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CACNA1CQ13936 2221 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 RTTNQ86VV8 2226 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 ACANP16112 2415 aa9.14□□□□□ -0.95
NEDD9-203ENST00000397378 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 OR6C74A6NCV1 312 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 MATN2O00339 956 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 POP7O75817 140 aaKnown RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 UNC5CO95185 931 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 HBQ1P09105 142 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 PIRTP0C851 137 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 FOSL1P15407 271 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 CYP2A7P20853 494 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 AGAP20933 346 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 CASP6P55212 293 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 IFI35P80217 286 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 DPYSL3Q14195 570 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 NFE2L1Q14494 772 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 SLC14A2Q15849 920 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 CYP2A13Q16696 494 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 PTCHD3Q3KNS1 767 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms