RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 HSD17B1P14061 328 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 CYP51A1Q16850 503 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 RFTN2Q52LD8 501 aaPredicted RBP23.36■■□□□ 1.33
PABPN1-202ENST00000397276 SGO1Q5FBB7 561 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 ANKRD33Q7Z3H0 272 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 KCTD14Q9BQ13 255 aaPredicted RBP23.36■■□□□ 1.33
PABPN1-202ENST00000397276 OSBPL11Q9BXB4 747 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 BRINP2Q9C0B6 783 aa23.36■■□□□ 1.33
PABPN1-202ENST00000397276 CCM2LQ9NUG4 571 aaPredicted RBP23.36■■□□□ 1.33
PABPN1-202ENST00000397276 NPIPB15A6NHN6 443 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 SEC24DO94855 1032 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 HMOX2P30519 316 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 VEGFBP49765 207 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 DGKQP52824 942 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 RFLNAQ6ZTI6 216 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 MICAL3Q7RTP6 2002 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ITIH5Q86UX2 942 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 RALGPS2Q86X27 583 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 TMEM199Q8N511 208 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ZUFSPQ96AP4 578 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 DUS3LQ96G46 650 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 HERC2P3Q9BVR0 1158 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PFDN4Q9NQP4 134 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ANGPTL3Q9Y5C1 460 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ACRV1P26436 265 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PSMD7P51665 324 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 AP5B1Q2VPB7 878 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 NANOGP8Q6NSW7 305 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PDLIM5Q96HC4 596 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ATP13A3Q9H7F0 1226 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 NANOGQ9H9S0 305 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 FARSBQ9NSD9 589 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ACTR3BQ9P1U1 418 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 LEF1Q9UJU2 399 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 POLR3HQ9Y535 204 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 TGM5O43548 720 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 CLIC3O95833 236 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 LATS1O95835 1130 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PSMA4P25789 261 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 VARSP26640 1264 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 RGS4P49798 205 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 INPP5AQ14642 412 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ARHGEF6Q15052 776 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PCBP2Q15366 365 aaKnown RBP eCLIP23.35■■□□□ 1.339e-14■■■■□ 22.5
PABPN1-202ENST00000397276 PLEKHG6Q3KR16 790 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ERMP1Q7Z2K6 904 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 GPR26Q8NDV2 337 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ACDQ96AP0 544 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ZNF689Q96CS4 500 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 PPM1MQ96MI6 270 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 FAM126AQ9BYI3 521 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 ABCB8Q9NUT2 735 aa23.35■■□□□ 1.33
PABPN1-202ENST00000397276 TNPO3Q9Y5L0 923 aaKnown RBP23.35■■□□□ 1.33
PABPN1-202ENST00000397276 EEDO75530 441 aaKnown RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 RSL1D1O76021 490 aaKnown RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 OLFM2O95897 454 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 IL10P22301 178 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 UHRF1Q96T88 793 aaPredicted RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 TRIM54Q9BYV2 358 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 PNPLA3Q9NST1 481 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 ARMC1Q9NVT9 282 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 WWOXQ9NZC7 414 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 CCL5P13501 91 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 PRKG2Q13237 762 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 CDKN3Q16667 212 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 PDCD4Q53EL6 469 aaKnown RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 DDX53Q86TM3 631 aaKnown RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 MYLIPQ8WY64 445 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 C12orf43Q96C57 262 aaKnown RBP23.34■■□□□ 1.33
PABPN1-202ENST00000397276 ISOC1Q96CN7 298 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 ASIC4Q96FT7 647 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 TRIM15Q9C019 465 aa23.34■■□□□ 1.33
PABPN1-202ENST00000397276 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.33■■□□□ 1.33
PABPN1-202ENST00000397276 NAA20P61599 178 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 BNIP2Q12982 314 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 NHSL2Q5HYW2 709 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 ZNF786Q8N393 782 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 CBR4Q8N4T8 237 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 ZBTB2Q8N680 514 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 MTFMTQ96DP5 389 aaKnown RBP23.33■■□□□ 1.33
PABPN1-202ENST00000397276 KIAA1522Q9P206 1035 aaPredicted RBP23.33■■□□□ 1.33
PABPN1-202ENST00000397276 OGDHLQ9ULD0 1010 aa23.33■■□□□ 1.33
PABPN1-202ENST00000397276 AQP12BA6NM10 295 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 LSM1O15116 133 aaKnown RBP23.33■■□□□ 1.32
PABPN1-202ENST00000397276 IGSF6O95976 241 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 SLC2A4P14672 509 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 DGKAP23743 735 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 HMGCS1Q01581 520 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 TRAF3Q13114 568 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 CYP20A1Q6UW02 462 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 AQP12AQ8IXF9 295 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 CMTR2Q8IYT2 770 aaKnown RBP23.33■■□□□ 1.32
PABPN1-202ENST00000397276 SMYD1Q8NB12 490 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 SEPHS2Q99611 448 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 OSBPL6Q9BZF3 934 aa23.33■■□□□ 1.32
PABPN1-202ENST00000397276 PTBP2Q9UKA9 531 aaKnown RBP23.33■■□□□ 1.32
PABPN1-202ENST00000397276 FAM234BA2RU67 622 aa23.32■■□□□ 1.32
PABPN1-202ENST00000397276 OTCP00480 354 aa23.32■■□□□ 1.32
PABPN1-202ENST00000397276 SERPINA4P29622 427 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms