RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 AGRPO00253 132 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 AP2A2O94973 939 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 MPSTP25325 297 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 IVDP26440 423 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 PPARGP37231 505 aaPredicted RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 TSPAN7P41732 249 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 GRIA1P42261 906 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 NPY2RP49146 381 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 CDKN1CP49918 316 aaPredicted RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 ARSDP51689 593 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 MRPS25P82663 173 aaKnown RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 CBX1P83916 185 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 GPR18Q14330 331 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 SNAP47Q5SQN1 464 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 KLHL35Q6PF15 583 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 AFTPHQ6ULP2 937 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 PDZD3Q86UT5 571 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 CFAP206Q8IYR0 622 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 HDAC10Q969S8 669 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 RUFY1Q96T51 708 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 FMO2Q99518 471 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 PSMD13Q9UNM6 376 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 TCAF1Q9Y4C2 921 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 HEBP2Q9Y5Z4 205 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 MN1Q10571 1320 aaPredicted RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 CCDC162PA2VCL2 907 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 TOX3O15405 576 aaPredicted RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 C9P02748 559 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 SLC35G4P0C7Q5 338 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 FGF3P11487 239 aaPredicted RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 MTHFD1P11586 935 aaKnown RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 CCL4P13236 92 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 TYRP1P17643 537 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 FOXN2P32314 431 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 NSG1P42857 185 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 TMPRSS3P57727 454 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 RAB15P59190 212 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 SARNPP82979 210 aaKnown RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 ACVR1Q04771 509 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 GPS1Q13098 491 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 SLMAPQ14BN4 828 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 TRIP13Q15645 432 aaPredicted RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 DBN1Q16643 649 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 PCID2Q5JVF3 399 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 CERS6Q6ZMG9 384 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 CROCCP2Q86T23 111 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 PIANPQ8IYJ0 282 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 OR13J1Q8NGT2 312 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 ZDHHC12Q96GR4 267 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 SGSM3Q96HU1 749 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 C12orf66Q96MD2 445 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 IL22Q9GZX6 179 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 RAB33BQ9H082 229 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 WWP1Q9H0M0 922 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 PRORYQ9H606 182 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 ZDHHC18Q9NUE0 388 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 IMP3Q9NV31 184 aaKnown RBP14.24□□□□□ -0.13
SEC13-208ENST00000397109 BFARQ9NZS9 450 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 EPHA6Q9UF33 1036 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 PCDHGA3Q9Y5H0 932 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 COLEC10Q9Y6Z7 277 aa14.24□□□□□ -0.13
SEC13-208ENST00000397109 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 EFCAB7A8K855 629 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 A8MU76 341 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 C9orf172C9J069 976 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 GOLGA8KD6RF30 607 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 PRAMEF10O60809 474 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 POLBP06746 335 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 ANKRD34CP0C6C1 535 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 LIPCP11150 499 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 TPSB2P20231 275 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 NDUFS1P28331 727 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 OAS2P29728 719 aaKnown RBP14.23□□□□□ -0.13
SEC13-208ENST00000397109 PRAMEP78395 509 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 RPA4Q13156 261 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 CLN3Q13286 438 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 KCNJ11Q14654 390 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 TPSAB1Q15661 275 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 CAPRIN2Q6IMN6 1127 aaKnown RBP14.23□□□□□ -0.13
SEC13-208ENST00000397109 PACS1Q6VY07 963 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 GSPT2Q8IYD1 628 aaKnown RBP14.23□□□□□ -0.13
SEC13-208ENST00000397109 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 OR4L1Q8NH43 312 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 ART4Q93070 314 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 C9orf72Q96LT7 481 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 INSM2Q96T92 566 aaPredicted RBP14.23□□□□□ -0.13
SEC13-208ENST00000397109 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 DDA1Q9BW61 102 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 ASPSCR1Q9BZE9 553 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 SLC39A1Q9NY26 324 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 FAM8A1Q9UBU6 413 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 ASIC3Q9UHC3 531 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
SEC13-208ENST00000397109 PCDHB11Q9Y5F2 797 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms