RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 NAF1Q96HR8 494 aaKnown RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 TGM7Q96PF1 710 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 INSM2Q96T92 566 aaPredicted RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 TFB2MQ9H5Q4 396 aaKnown RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SYTL2Q9HCH5 934 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 PDE7BQ9NP56 450 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 CHRAC1Q9NRG0 131 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 PIH1D1Q9NWS0 290 aaKnown RBP18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SEMA5BQ9P283 1151 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SLC24A2Q9UI40 661 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 SOX13Q9UN79 622 aa18.86■□□□□ 0.61
CDKN1B-202ENST00000396340 OR5K3A6NET4 321 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 SDR42E2A6NKP2 422 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 A8MU76 341 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 C9orf172C9J069 976 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 PRMT5O14744 637 aaPredicted RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CASC3O15234 703 aaKnown RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CD3EAPO15446 510 aaKnown RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 MT-ND3P03897 115 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 APOA4P06727 396 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 POLBP06746 335 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CCL4P13236 92 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 MAP4P27816 1152 aaKnown RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 ITPKBP27987 946 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 PAFAH1B1P43034 410 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 ARSDP51689 593 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CXADRP78310 365 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 ACY1Q03154 408 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CLN3Q13286 438 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 MAP7Q14244 749 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 PPP1R7Q15435 360 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CACHD1Q5VU97 1274 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 IRGCQ6NXR0 463 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 TBC1D21Q8IYX1 336 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CLDN19Q8N6F1 224 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 BMPERQ8N8U9 685 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 KLHL6Q8WZ60 621 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 ELMO1Q92556 727 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 TFGQ92734 400 aaPredicted RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 SLCO2A1Q92959 643 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 KIAA1143Q96AT1 154 aaPredicted RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 AP1M1Q9BXS5 423 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 OR52A5Q9H2C5 316 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 TREX1Q9NSU2 369 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 HRASLS2Q9NWW9 162 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 TRMT1Q9NXH9 659 aaKnown RBP18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 GNPTGQ9UJJ9 305 aa18.85■□□□□ 0.61
CDKN1B-202ENST00000396340 CFAP47Q6ZTR5 3102 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 UBA6A0AVT1 1052 aaPredicted RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 CCDC78A2IDD5 438 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 CTAGE9A4FU28 777 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 EIF4E1BA6NMX2 242 aaKnown RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 K7ENP7 123 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 ERVH48-1M5A8F1 160 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 CCL22O00626 93 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 NDUFS3O75489 264 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 GRIA1P42261 906 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 ADARP55265 1226 aaKnown RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 KCNJ11Q14654 390 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 DNAJC21Q5F1R6 531 aaKnown RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 DNTTIP2Q5QJE6 756 aaKnown RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 INO80CQ6PI98 192 aaPredicted RBP18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 IL22RA1Q8N6P7 574 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 PHC3Q8NDX5 983 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 LCN9Q8WX39 176 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 FERD3LQ96RJ6 166 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 NAT9Q9BTE0 207 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 FAM117AQ9C073 453 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 KCNF1Q9H3M0 494 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 SRMSQ9H3Y6 488 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 OGFRQ9NZT2 677 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 TMEM9Q9P0T7 183 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 KLHL3Q9UH77 587 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 SAR1BQ9Y6B6 198 aa18.84■□□□□ 0.61
CDKN1B-202ENST00000396340 CCDC188H7C350 402 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 NELFEP18615 380 aaKnown RBP18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 RPS3P23396 243 aaKnown RBP eCLIP18.83■□□□□ 0.66e-12■■■■□ 19.6
CDKN1B-202ENST00000396340 MPSTP25325 297 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 SHMT2P34897 504 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 CA5AP35218 305 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 ETV5P41161 510 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 CDKN1CP49918 316 aaPredicted RBP18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 GNG11P61952 73 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 HSD11B2P80365 405 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 KIAA0930Q6ICG6 404 aaPredicted RBP18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 CASC4Q6P4E1 433 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 TTC23LQ6PF05 361 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 HOOK3Q86VS8 718 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 PPIL6Q8IXY8 311 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 CALML6Q8TD86 181 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 MS4A14Q96JA4 679 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 NAPGQ99747 312 aaPredicted RBP18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 FANCEQ9HB96 536 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 C1GALT1Q9NS00 363 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 FAM8A1Q9UBU6 413 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 PCYOX1Q9UHG3 505 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 B3GALT1Q9Y5Z6 326 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 SDK2Q58EX2 2172 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 ITPR1Q14643 2758 aa18.83■□□□□ 0.6
CDKN1B-202ENST00000396340 LAMA5O15230 3695 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms