RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 STEAP4Q687X5 459 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 PTRHD1Q6GMV3 140 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 TRMT10BQ6PF06 316 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 CEP128Q6ZU80 1094 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 TMEM26Q6ZUK4 368 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 B3GNT8Q7Z7M8 397 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 LRRC6Q86X45 466 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 ZBED8Q8IZ13 594 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 FBXO36Q8NEA4 188 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 JPH3Q8WXH2 748 aaPredicted RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 C12orf66Q96MD2 445 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 DEPDC7Q96QD5 511 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 MTRF1LQ9UGC7 380 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 NFU1Q9UMS0 254 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 D6RAR5 112 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 LIN7AO14910 233 aaPredicted RBP16.17■□□□□ 0.18
CXCL1-201ENST00000395761 HOXB3P14651 431 aaPredicted RBP16.17■□□□□ 0.18
CXCL1-201ENST00000395761 MAPK9P45984 424 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 VSNL1P62760 191 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 RPA4Q13156 261 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 GPR18Q14330 331 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 ZNF574Q6ZN55 896 aaPredicted RBP16.17■□□□□ 0.18
CXCL1-201ENST00000395761 RELL1Q8IUW5 271 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 SPNS2Q8IVW8 549 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 AVL9Q8NBF6 648 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 FMO2Q99518 471 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 NUDT22Q9BRQ3 303 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.17■□□□□ 0.18
CXCL1-201ENST00000395761 UCK1Q9HA47 277 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 SAYSD1Q9NPB0 183 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 POT1Q9NUX5 634 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 INTS10Q9NVR2 710 aaKnown RBP16.17■□□□□ 0.18
CXCL1-201ENST00000395761 SLC17A6Q9P2U8 582 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 GALPQ9UBC7 116 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 GNPTGQ9UJJ9 305 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 FBXO5Q9UKT4 447 aa16.17■□□□□ 0.18
CXCL1-201ENST00000395761 PIKFYVEQ9Y2I7 2098 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 F8W8V4 182 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 PFDN6O15212 129 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 ZW10O43264 779 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 NIPSNAP2O75323 286 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 HAUS5O94927 633 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CPNE6O95741 557 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 MPSTP25325 297 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 AOAHP28039 575 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CSF2RBP32927 897 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 ADARP55265 1226 aaKnown RBP16.16■□□□□ 0.18
CXCL1-201ENST00000395761 SQSTM1Q13501 440 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 ZNF549Q6P9A3 640 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 PIM3Q86V86 326 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 VRK3Q8IV63 474 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 PHC3Q8NDX5 983 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 OR10G6Q8NH81 332 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CALML6Q8TD86 181 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CERS2Q96G23 380 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 ATXN7L3BQ96GX2 97 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 FAM167BQ9BTA0 163 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 SEMA6CQ9H3T2 930 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 PPANQ9NQ55 473 aaKnown RBP16.16■□□□□ 0.18
CXCL1-201ENST00000395761 OGFRQ9NZT2 677 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 TMEM9Q9P0T7 183 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 CDYLQ9Y232 598 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 ENTPD2Q9Y5L3 495 aa16.16■□□□□ 0.18
CXCL1-201ENST00000395761 TRABD2BA6NFA1 517 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 LILRA5A6NI73 299 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 GPC4O75487 556 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 ESR1P03372 595 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 MYBL2P10244 700 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 PKMP14618 531 aaKnown RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 TYRP1P17643 537 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 ACADLP28330 430 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 GABRB3P28472 473 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 CD151P48509 253 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 PPM1FP49593 454 aaPredicted RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 EPHA4P54764 986 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 GPLD1P80108 840 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 ZFP36L1Q07352 338 aaKnown RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 HSPA14Q0VDF9 509 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 MAP9Q49MG5 647 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 SYTL3Q4VX76 610 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 TEDDM1Q5T9Z0 273 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 ZNF449Q6P9G9 518 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 CAPN12Q6ZSI9 719 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 PDZD3Q86UT5 571 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 SLITRK4Q8IW52 837 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 CNTN4Q8IWV2 1026 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 RBM12BQ8IXT5 1001 aaKnown RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 C2CD4AQ8NCU7 369 aaPredicted RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 ASZ1Q8WWH4 475 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 GATA6Q92908 595 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 TMEM159Q96B96 161 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 AHCYL2Q96HN2 611 aaKnown RBP16.15■□□□□ 0.18
CXCL1-201ENST00000395761 FERD3LQ96RJ6 166 aa16.15■□□□□ 0.18
CXCL1-201ENST00000395761 NRTNQ99748 197 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms