RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C2CD4AQ8NCU7 369 aaPredicted RBP19.45■□□□□ 0.7
SNCA-203ENST00000394986 WDR48Q8TAF3 677 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 GSDMBQ8TAX9 411 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 PYROXD1Q8WU10 500 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 SH3KBP1Q96B97 665 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 C9orf72Q96LT7 481 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 DEPDC7Q96QD5 511 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 TSSK1BQ9BXA7 367 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 COL27A1Q8IZC6 1860 aaPredicted RBP19.45■□□□□ 0.7
SNCA-203ENST00000394986 LILRA5A6NI73 299 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 ESPNB1AK53 854 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 F8W8V4 182 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 AGRPO00253 132 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 EIF3HO15372 352 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNCA-203ENST00000394986 ESR1P03372 595 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 PKMP14618 531 aaKnown RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 HOXB3P14651 431 aaPredicted RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 TYRP1P17643 537 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 MPSTP25325 297 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 AOAHP28039 575 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 GABRB3P28472 473 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 ADARP55265 1226 aaKnown RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 ISXQ2M1V0 245 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 GLE1Q53GS7 698 aaKnown RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 DNTTIP2Q5QJE6 756 aaKnown RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 CNTN4Q8IWV2 1026 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 PHC3Q8NDX5 983 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 IFT81Q8WYA0 676 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 TMEM159Q96B96 161 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 PANX3Q96QZ0 392 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.44■□□□□ 0.7
SNCA-203ENST00000394986 ZMYND15Q9H091 742 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 L2HGDHQ9H9P8 463 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 FAM114A2Q9NRY5 505 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 TMEM9Q9P0T7 183 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 CDYLQ9Y232 598 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 VPS9D1Q9Y2B5 631 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 MSRB2Q9Y3D2 182 aa19.44■□□□□ 0.7
SNCA-203ENST00000394986 FAM221BA6H8Z2 402 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 IFRD1O00458 451 aaPredicted RBP19.43■□□□□ 0.7
SNCA-203ENST00000394986 GPC4O75487 556 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 PIAS1O75925 651 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 CPNE6O95741 557 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 SSTR1P30872 391 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 TEDDM1Q5T9Z0 273 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 ZNF449Q6P9G9 518 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 OR10G6Q8NH81 332 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 ATXN7L3BQ96GX2 97 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 AHCYL2Q96HN2 611 aaKnown RBP19.43■□□□□ 0.7
SNCA-203ENST00000394986 NRTNQ99748 197 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 SEMA6CQ9H3T2 930 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 UCK1Q9HA47 277 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 OGFRQ9NZT2 677 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 TSR3Q9UJK0 312 aaKnown RBP19.43■□□□□ 0.7
SNCA-203ENST00000394986 ENTPD2Q9Y5L3 495 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 AKAP13Q12802 2813 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 PTPRBP23467 1997 aa19.43■□□□□ 0.7
SNCA-203ENST00000394986 DUX1O43812 170 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 APOA4P06727 396 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 RHOXF2BP0C7M4 288 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 CHRM3P20309 590 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 LEPRP48357 1165 aaKnown RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 GPX6P59796 221 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 GPLD1P80108 840 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 FOXK2Q01167 660 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 CAMK2BQ13554 666 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 FRG1Q14331 258 aaKnown RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 TMED2Q15363 201 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 ZNF574Q6ZN55 896 aaPredicted RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 OTOAQ7RTW8 1153 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PIM3Q86V86 326 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PALM2Q8IXS6 379 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 RBM12BQ8IXT5 1001 aaKnown RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 ASZ1Q8WWH4 475 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 NCSTNQ92542 709 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 RSC1A1Q92681 617 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 TFGQ92734 400 aaPredicted RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 FERD3LQ96RJ6 166 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 NDNQ99608 321 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 SLC30A3Q99726 388 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 RHOXF2Q9BQY4 288 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 HGH1Q9BTY7 390 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 SMYD2Q9NRG4 433 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 MOCS1Q9NZB8 636 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 MED16Q9Y2X0 877 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PMS2P1A4D2B8 440 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 H3BMM5 538 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 ZW10O43264 779 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 UBXN7O94888 489 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 AHSGP02765 367 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 ACADLP28330 430 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 ECHS1P30084 290 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 MAGEA4P43358 317 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 CD151P48509 253 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 EPHA4P54764 986 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 MGAT5Q09328 741 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PRKG2Q13237 762 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 KRT33BQ14525 404 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PLCL1Q15111 1095 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 RBM20Q5T481 1227 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms