RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 COMMD8Q9NX08 183 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 TBC1D14Q9P2M4 693 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ZNF212Q9UDV6 495 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 DGKBQ9Y6T7 804 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 WDR87Q6ZQQ6 2873 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 MAPK10P53779 464 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ERVPABLB-1P60509 514 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 TUBB3Q13509 450 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 KLHDC10Q6PID8 442 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ZBTB46Q86UZ6 589 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 KCNJ9Q92806 393 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 BIRC8Q96P09 236 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 DERL2Q9GZP9 239 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 WBP1LQ9NX94 342 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 TSPAN6O43657 245 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 CACNG3O60359 315 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ADH1CP00326 375 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ABRAXAS2Q15018 415 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 HSD11B1LQ7Z5J1 315 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 PGAM4Q8N0Y7 254 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 SPPL3Q8TCT6 385 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ACTRT2Q8TDY3 377 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 CANT1Q8WVQ1 401 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 SDCCAG3Q96C92 435 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 RANBP9Q96S59 729 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 PRPF18Q99633 342 aaKnown RBP15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 MMADHCQ9H3L0 296 aaPredicted RBP15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 MAGEE1Q9HCI5 957 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 ZNF510Q9Y2H8 683 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 PCDHB1Q9Y5F3 818 aa15.62■□□□□ 0.09
SMARCD1-202ENST00000394963 CD160O95971 181 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 LHCGRP22888 699 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 PAX7P23759 505 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 GDI1P31150 447 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 POLR2JP52435 117 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CREMQ03060 361 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 TMEM31Q5JXX7 168 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 SFTPA1Q8IWL2 248 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 PQLC1Q8N2U9 271 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 ERVW-1Q9UQF0 538 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 C16orf96A6NNT2 1141 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 PAK4O96013 591 aaPredicted RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 PSMA4P25789 261 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CDC16Q13042 620 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 INPP5AQ14642 412 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 SAMD4BQ5PRF9 694 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 RNF220Q5VTB9 566 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 LIX1Q8N485 282 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 KRTCAP2Q8N6L1 136 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 OR52E6Q96RD3 313 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 ATOH8Q96SQ7 321 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CCDC28BQ9BUN5 200 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CCDC90BQ9GZT6 254 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 USP22Q9UPT9 525 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 DHRS7Q9Y394 339 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 TNPO3Q9Y5L0 923 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 SEC16AO15027 2179 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 H3BM21 787 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 TRIM38O00635 465 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 ALDOCP09972 364 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 ETS2P15036 469 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CCNIQ14094 377 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 SYT12Q8IV01 421 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 CPSF7Q8N684 471 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 KCTD5Q9NXV2 234 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 SNX8Q9Y5X2 465 aa15.61■□□□□ 0.09
SMARCD1-202ENST00000394963 LINC01553A4QN01 128 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 ZNF195O14628 629 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 SLC9A3R1O14745 358 aaPredicted RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 UROSP10746 265 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 MTHFD2P13995 350 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 POLD2P49005 469 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 HK3P52790 923 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 ADGRD2Q7Z7M1 963 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 C11orf74Q86VG3 221 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 MAGEE2Q8TD90 523 aaPredicted RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 BPIFB1Q8TDL5 484 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 ADAMTS19Q8TE59 1207 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 TRIB3Q96RU7 358 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 CAPN10Q9HC96 672 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 IMP3Q9NV31 184 aaKnown RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 INTS7Q9NVH2 962 aaKnown RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 ELOVL2Q9NXB9 296 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 STK39Q9UEW8 545 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 IL36AQ9UHA7 158 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 PRORSD1PA6NEY8 169 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 RGS14O43566 566 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 MESP2Q0VG99 397 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 RFTN2Q52LD8 501 aaPredicted RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 SFT2D3Q587I9 215 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 TMEM240Q5SV17 173 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 PHACTR4Q8IZ21 702 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 OR10A6Q8NH74 314 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 OR14C36Q8NHC7 312 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 CXorf40AQ8TE69 158 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 ASZ1Q8WWH4 475 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 TRMT2BQ96GJ1 504 aaKnown RBP15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 IL17FQ96PD4 163 aa15.6■□□□□ 0.09
SMARCD1-202ENST00000394963 RUBCNLQ9H714 662 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms