RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TMEM150CB9EJG8 249 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 KRT86O43790 486 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 POLBP06746 335 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 CYP2A7P20853 494 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 VARSP26640 1264 aaKnown RBP20.54■□□□□ 0.88
TRAF4-203ENST00000394925 ATP1A4Q13733 1029 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 PTCHD3Q3KNS1 767 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 CAVIN1Q6NZI2 390 aaKnown RBP20.54■□□□□ 0.88
TRAF4-203ENST00000394925 FAM198BQ6UWH4 519 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 MFSD7Q6UXD7 560 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 MAMDC2Q7Z304 686 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-203ENST00000394925 SYTL1Q8IYJ3 562 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 GLIS1Q8NBF1 620 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 OXNAD1Q96HP4 312 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-203ENST00000394925 RMDN2Q96LZ7 410 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 C1GALT1Q9NS00 363 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 KLHL8Q9P2G9 620 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-203ENST00000394925 POMT2Q9UKY4 750 aa20.54■□□□□ 0.88
TRAF4-203ENST00000394925 GSAPA4D1B5 854 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 STX7O15400 261 aaKnown RBP20.53■□□□□ 0.88
TRAF4-203ENST00000394925 PECAM1P16284 738 aaPredicted RBP20.53■□□□□ 0.88
TRAF4-203ENST00000394925 ARHGAP25P42331 645 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 PREPP48147 710 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 NR2C2P49116 596 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 RRADP55042 308 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 LLGL1Q15334 1064 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 BZW1Q7L1Q6 419 aaKnown RBP20.53■□□□□ 0.88
TRAF4-203ENST00000394925 PID1Q7Z2X4 250 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 DAAM2Q86T65 1068 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 CFAP206Q8IYR0 622 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 LILRA3Q8N6C8 439 aaPredicted RBP20.53■□□□□ 0.88
TRAF4-203ENST00000394925 SMAD5Q99717 465 aaKnown RBP20.53■□□□□ 0.88
TRAF4-203ENST00000394925 SLC7A5P2Q9GIP4 190 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 DEF6Q9H4E7 631 aa20.53■□□□□ 0.88
TRAF4-203ENST00000394925 PCSK5Q92824 1860 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 PRAMEF1O95521 474 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 CLDN1O95832 211 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 NDUFS1P28331 727 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 HNRNPH3P31942 346 aaKnown RBP20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
TRAF4-203ENST00000394925 NR6A1Q15406 480 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 KYNUQ16719 465 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ASTE1Q2TB18 679 aaPredicted RBP20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ZNF789Q5FWF6 425 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 LRRC38Q5VT99 294 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ZNF567Q8N184 647 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 TCTN2Q96GX1 697 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 SGSM3Q96HU1 749 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 FCRL5Q96RD9 977 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 SYTL2Q9HCH5 934 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 DDX56Q9NY93 547 aaKnown RBP20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ERRFI1Q9UJM3 462 aaPredicted RBP20.52■□□□□ 0.88
TRAF4-203ENST00000394925 HYOU1Q9Y4L1 999 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 ARL5AQ9Y689 179 aa20.52■□□□□ 0.88
TRAF4-203ENST00000394925 CCDC88CQ9P219 2028 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 KLHL33A6NCF5 533 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ENO4A6NNW6 628 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 CST8O60676 142 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ST6GAL1P15907 406 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 PRDX3P30048 256 aaKnown RBP20.51■□□□□ 0.87
TRAF4-203ENST00000394925 LMAN1P49257 510 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 NCF4Q15080 339 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 PLEKHN1Q494U1 663 aaPredicted RBP20.51■□□□□ 0.87
TRAF4-203ENST00000394925 BCL7AQ4VC05 210 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 KAZNQ674X7 775 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ZC3H18Q86VM9 953 aaKnown RBP20.51■□□□□ 0.87
TRAF4-203ENST00000394925 RAB43Q86YS6 212 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ACVR1CQ8NER5 493 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 LCN9Q8WX39 176 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 SNRNP40Q96DI7 357 aaKnown RBP20.51■□□□□ 0.87
TRAF4-203ENST00000394925 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 KLHL25Q9H0H3 589 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 SRMSQ9H3Y6 488 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 ASB8Q9H765 288 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 IFNKQ9P0W0 207 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 SERTAD3Q9UJW9 196 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 HEBP2Q9Y5Z4 205 aa20.51■□□□□ 0.87
TRAF4-203ENST00000394925 MATN2O00339 956 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 MAP3K7O43318 606 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 SGTAO43765 313 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 AKR1B10O60218 316 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 OTX2P32243 289 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 DCTP40126 519 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 CDKN2BP42772 138 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 MPP3Q13368 585 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 TFDP2Q14188 446 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 IQCKQ8N0W5 287 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 CISD2Q8N5K1 135 aaKnown RBP20.5■□□□□ 0.87
TRAF4-203ENST00000394925 OR4K2Q8NGD2 314 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 LINC00615Q96LM1 132 aaPredicted RBP20.5■□□□□ 0.87
TRAF4-203ENST00000394925 FERD3LQ96RJ6 166 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 NRTNQ99748 197 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 CCM2Q9BSQ5 444 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 ASF1BQ9NVP2 202 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 C5AR2Q9P296 337 aa20.5■□□□□ 0.87
TRAF4-203ENST00000394925 WIPF3A6NGB9 483 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 C9J4A7 227 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 E7EQ34 232 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 BTN3A3O00478 584 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms