RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 PAF1Q8N7H5 531 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 LKAAEAR1Q8TD35 194 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 NCLNQ969V3 563 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 DGCR6LQ9BY27 220 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 KLQ9UEF7 1012 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 PCDHGA8Q9Y5G5 932 aa13.71□□□□□ -0.21
GAPVD1-205ENST00000394084 OR6C75A6NL08 312 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 GOLGA8CPA6NN73 597 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 H0Y626 953 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 INPPL1O15357 1258 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 TRIM16O95361 564 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 EOMESO95936 686 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 NPPAP01160 153 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 ESR1P03372 595 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 PIGAP37287 484 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 PTGER3P43115 390 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 FLT3LGP49771 235 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 TRAF3Q13114 568 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 LDLRAP1Q5SW96 308 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 ABI1Q8IZP0 508 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 LEMD2Q8NC56 503 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 BHMTQ93088 406 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 BORCS5Q969J3 196 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 FAM162AQ96A26 154 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 EID2BQ96D98 161 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 PLEKHA8Q96JA3 519 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 YTHDF1Q9BYJ9 559 aaKnown RBP13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 U3KQV3 271 aa13.71□□□□□ -0.22
GAPVD1-205ENST00000394084 ARNTLO00327 626 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CPNE6O95741 557 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 RPLP2P05387 115 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CKBP12277 381 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CORO1AP31146 461 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 BMXP51813 675 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 ARF5P84085 180 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 ATP1A4Q13733 1029 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 ZNF829Q3KNS6 432 aaPredicted RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 XAF1Q6GPH4 301 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 WBP2Q969T9 261 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 SLC47A1Q96FL8 570 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 ZBTB18Q99592 522 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CHCHD3Q9NX63 227 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 DOLKQ9UPQ8 538 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 DHRS7Q9Y394 339 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 PRMT5O14744 637 aaPredicted RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 PRKD3O94806 890 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 ZDHHC11BP0C7U3 371 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 RPL17P18621 184 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 AGXTP21549 392 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CLCN4P51793 760 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 CYP4F3Q08477 520 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 GPR17Q13304 367 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 MRPL58Q14197 206 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 MAPKAPK3Q16644 382 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 LIX1Q8N485 282 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 TERB1Q8NA31 727 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 AMBRA1Q9C0C7 1298 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 FCF1Q9Y324 198 aaKnown RBP13.7□□□□□ -0.22
GAPVD1-205ENST00000394084 A8MX80 341 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 TAPBPO15533 448 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 CLDN11O75508 207 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 BCL10O95999 233 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 OTCP00480 354 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 CRHBPP24387 322 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 GCNT7Q6ZNI0 430 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 ADAMTSL2Q86TH1 951 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 GTF2H4Q92759 462 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 AURKBQ96GD4 344 aaPredicted RBP13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 MBOAT4Q96T53 435 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 DPY30Q9C005 99 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.225e-11■■■■□ 24
GAPVD1-205ENST00000394084 P2RY12Q9H244 342 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 ACTR8Q9H981 624 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 C1orf232A0A0U1RR37 186 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 DYTNA2CJ06 578 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 RAD51BO15315 384 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 ADAM12O43184 909 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 HS6ST1O60243 411 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 ABCB7O75027 752 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 PRSS23O95084 383 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 CCR3P51677 355 aa13.69□□□□□ -0.22
GAPVD1-205ENST00000394084 KIAA0040Q15053 153 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms