RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF557Q8N988 423 aaPredicted RBP25.12■■□□□ 1.61
SMARCD3-203ENST00000392811 UHRF1Q96T88 793 aaPredicted RBP25.12■■□□□ 1.61
SMARCD3-203ENST00000392811 RAD9AQ99638 391 aa25.12■■□□□ 1.61
SMARCD3-203ENST00000392811 TBC1D14Q9P2M4 693 aa25.12■■□□□ 1.61
SMARCD3-203ENST00000392811 RAB26Q9ULW5 256 aa25.12■■□□□ 1.61
SMARCD3-203ENST00000392811 FFAR3O14843 346 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 GPR42O15529 346 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 OR56A5P0C7T3 313 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 CASP2P42575 452 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 RECQLP46063 649 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 PIK3CGP48736 1102 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 PRKG2Q13237 762 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 RFTN2Q52LD8 501 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 CYP20A1Q6UW02 462 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 DET1Q7L5Y6 550 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 CANT1Q8WVQ1 401 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 SORCS1Q8WY21 1168 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 ACTL8Q9H568 366 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 WBP1LQ9NX94 342 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 SLAMF8Q9P0V8 285 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 POLR3HQ9Y535 204 aaPredicted RBP25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 SNX13Q9Y5W8 968 aa25.11■■□□□ 1.61
SMARCD3-203ENST00000392811 EPCAMP16422 314 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 AOAHP28039 575 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 PPIGQ13427 754 aaKnown RBP eCLIP25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 ARHGEF7Q14155 803 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 SPATS1Q496A3 300 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 METTL2BQ6P1Q9 378 aaKnown RBP25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 UGT2A3Q6UWM9 527 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 MARVELD2Q8N4S9 558 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 CYB5D2Q8WUJ1 264 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 EME1Q96AY2 570 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 EFHD1Q9BUP0 239 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 TRIM15Q9C019 465 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 PKD2L2Q9NZM6 624 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 RNF11Q9Y3C5 154 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 PDE4DIPQ5VU43 2346 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 POLR2EP19388 210 aaKnown RBP25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 MSH3P20585 1137 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 PAX7P23759 505 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 RNF220Q5VTB9 566 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 IRAK1BP1Q5VVH5 260 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 LCN8Q6JVE9 175 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 BRAT1Q6PJG6 821 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 KIAA0907Q7Z7F0 614 aaPredicted RBP25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 SPPL2CQ8IUH8 684 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 PLPP6Q8IY26 295 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 KIAA2013Q8IYS2 634 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 FRS2Q8WU20 508 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 BADQ92934 168 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 HEPHQ9BQS7 1158 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 NTMT1Q9BV86 223 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 SPATA16Q9BXB7 569 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 Q9H521 79 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 ACTR3BQ9P1U1 418 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 CNOT11Q9UKZ1 510 aaKnown RBP25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 AP4B1Q9Y6B7 739 aa25.1■■□□□ 1.61
SMARCD3-203ENST00000392811 AQP12BA6NM10 295 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 TTC34A8MYJ7 566 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 STK16O75716 305 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 ANXA5P08758 320 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 EPB42P16452 691 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 ZNF26P17031 533 aaPredicted RBP25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 GSK3BP49841 420 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 PRSS36Q5K4E3 855 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 HMBOX1Q6NT76 420 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 SLC2A7Q6PXP3 512 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 RTL10Q7L3V2 364 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 AQP12AQ8IXF9 295 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 AHI1Q8N157 1196 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 FAM110BQ8TC76 370 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 MRGPRX3Q96LB0 322 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 PPP3R2Q96LZ3 170 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 FARSBQ9NSD9 589 aaKnown RBP25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 INTS7Q9NVH2 962 aaKnown RBP25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 KLQ9UEF7 1012 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 PDE10AQ9Y233 779 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 AK5Q9Y6K8 562 aa25.09■■□□□ 1.61
SMARCD3-203ENST00000392811 LOC730098B7Z3J9 87 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ANKRD28O15084 1053 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 TLL1O43897 1013 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 IRS1P35568 1242 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 RPIAP49247 311 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 HSPA14Q0VDF9 509 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 GRM2Q14416 872 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 MTX3Q5HYI7 312 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 HSD11B1LQ7Z5J1 315 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 AMIGO2Q86SJ2 522 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ALG2Q9H553 416 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ARMC1Q9NVT9 282 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ARL15Q9NXU5 204 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 TRPS1Q9UHF7 1281 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 EIF3FO00303 357 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ARPC2O15144 300 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 LEFTY1O75610 366 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 TIPRLO75663 272 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 EBLN1P0CF75 366 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 ATP1B2P14415 290 aaPredicted RBP25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 SLC2A4P14672 509 aa25.08■■□□□ 1.61
SMARCD3-203ENST00000392811 AKT1P31749 480 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms