RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MAB21L1Q13394 359 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 USP30Q70CQ3 517 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHANK1-203ENST00000391813 SNTG1Q9NSN8 517 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 CNTN3Q9P232 1028 aa19.42■□□□□ 0.7
SHANK1-203ENST00000391813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.41■□□□□ 0.7
SHANK1-203ENST00000391813 PRAMEF1O95521 474 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 C8orf48Q96LL4 319 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 FBXL21Q9UKT6 434 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 OR5F1O95221 314 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 IL1BP01584 269 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 FMO3P31513 532 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 MSS51Q4VC12 460 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF438Q7Z4V0 828 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 PHACTR4Q8IZ21 702 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 GLIS1Q8NBF1 620 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 TLE6Q9H808 572 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 AGO3Q9H9G7 860 aaKnown RBP19.41■□□□□ 0.7
SHANK1-203ENST00000391813 COL20A1Q9P218 1284 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 DPY19L1Q2PZI1 675 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 TXLNGYQ9BZA5 131 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 ADAMTS10Q9H324 1103 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 TRIT1Q9H3H1 467 aaKnown RBP19.41■□□□□ 0.7
SHANK1-203ENST00000391813 ZIM2Q9NZV7 527 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 K7EPI3 171 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 ERN1O75460 977 aaKnown RBP19.41■□□□□ 0.7
SHANK1-203ENST00000391813 CXCL14O95715 111 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 GLUD1P00367 558 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 PRKAG1P54619 331 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 MTPNP58546 118 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 HERVK_113P63132 956 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 MXD1Q05195 221 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 SCRN3Q0VDG4 424 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 LPPQ93052 612 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 SIPA1Q96FS4 1042 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 GPR21Q99679 349 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 ERVK-6Q9BXR3 956 aa19.41■□□□□ 0.7
SHANK1-203ENST00000391813 I3L521 148 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 NDST3O95803 873 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 PSKH1P11801 424 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 PROZP22891 400 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 DNASE1L3Q13609 305 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 RAB39AQ14964 217 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 GCNT6Q5T4J0 391 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 GPR156Q8NFN8 814 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 RFKQ969G6 155 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 TRNT1Q96Q11 434 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 TMEM209Q96SK2 561 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 PHOX2BQ99453 314 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 GAS2L1Q99501 681 aaPredicted RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 COPS8Q99627 209 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 YIPF2Q9BWQ6 316 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 ADAM7Q9H2U9 754 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 MLXQ9UH92 298 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 PCDHGB3Q9Y5G1 929 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 OAS3Q9Y6K5 1087 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 AOC2O75106 756 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 RLN1P04808 185 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 IFNA16P05015 189 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 WSCD2Q2TBF2 565 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 TRIM48Q8IWZ4 208 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 FBXO22Q8NEZ5 403 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 LOC100130705A0A1B0GUX0 176 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 B4GALT5O43286 388 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 CCNB2O95067 398 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 CLDN9O95484 217 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 DNAJA1P31689 397 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 MAPK12P53778 367 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 PCLAFQ15004 111 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 DCST1Q5T197 706 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 CHSY3Q70JA7 882 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 POLR2J2Q9GZM3 115 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 TFB2MQ9H5Q4 396 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 OR4F21O95013 312 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 METTL3Q86U44 580 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 TBATAQ96M53 351 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 OR2B2Q9GZK3 357 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 DNMT3LQ9UJW3 386 aa19.4■□□□□ 0.7
SHANK1-203ENST00000391813 RPL36Q9Y3U8 105 aaKnown RBP19.4■□□□□ 0.7
SHANK1-203ENST00000391813 OR14I1A6ND48 311 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 CPNE3O75131 537 aaKnown RBP19.39■□□□□ 0.7
SHANK1-203ENST00000391813 FAM174BQ3ZCQ3 159 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 IQCCQ4KMZ1 466 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 IFI44LQ53G44 452 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 PSRC1Q6PGN9 363 aaPredicted RBP19.39■□□□□ 0.7
SHANK1-203ENST00000391813 CGREF1Q99674 301 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 TCF25Q9BQ70 676 aa19.39■□□□□ 0.7
SHANK1-203ENST00000391813 FAM86C2PA6NEL3 165 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 MATN3O15232 486 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 CCNYL3P0C7X3 344 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 ARL2P36404 184 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 C1orf127Q8N9H9 656 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 GOLM1Q8NBJ4 401 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 RPF2Q9H7B2 306 aaKnown RBP19.39■□□□□ 0.69
SHANK1-203ENST00000391813 TRPS1Q9UHF7 1281 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 ZDHHC2Q9UIJ5 367 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 PAGE1O75459 146 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 EOMESO95936 686 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 HDCP19113 662 aa19.39■□□□□ 0.69
SHANK1-203ENST00000391813 GPR153Q6NV75 609 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms