RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C2CD4AQ8NCU7 369 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 PIK3R3Q92569 461 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 RHNO1Q9BSD3 238 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 C16orf70Q9BSU1 422 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 UGT2B28Q9BY64 529 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 SYTL2Q9HCH5 934 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 COMMD8Q9NX08 183 aa14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 TMEFF2Q9UIK5 374 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 LEF1Q9UJU2 399 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-201ENST00000389386 OR2A25A4D2G3 310 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 KRT87PA6NCN2 255 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 HMX3A6NHT5 357 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 AZIN1O14977 448 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 DCLK1O15075 740 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 SHOXO15266 292 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 HOXD8P13378 290 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 PPP1R8Q12972 351 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 LRRC26Q2I0M4 334 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 PARP15Q460N3 678 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 ZC3H12BQ5HYM0 836 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 UBE2Q1Q7Z7E8 422 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 TMEM179BQ7Z7N9 219 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 HORMAD1Q86X24 394 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 HID1Q8IV36 788 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 AMER2Q8N7J2 671 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC38A4Q969I6 547 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 SDHCQ99643 169 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 SCN3BQ9NY72 215 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 A0A1W2PQ72 361 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 RGS10O43665 173 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 AIREO43918 545 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 LCKP06239 509 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 LINC00032P0C843 101 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 MSL3P1P0C860 447 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 NAGAP17050 411 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 PCID2Q5JVF3 399 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 ENPP6Q6UWR7 440 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 NRARPQ7Z6K4 114 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 ANKRD49Q8WVL7 239 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 ELMO1Q92556 727 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 PDLIM5Q96HC4 596 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 NEDD4LQ96PU5 975 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 PHOX2BQ99453 314 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 LPIN3Q9BQK8 851 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 GON7Q9BXV9 100 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 AGO1Q9UL18 857 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 MKLN1Q9UL63 735 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 BTBD3Q9Y2F9 522 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 SCN1AP35498 2009 aa14.44□□□□□ -0.1
VPS9D1-201ENST00000389386 H3BQ06 376 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 PPEF2O14830 753 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC4A1P02730 911 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SMPD1P17405 629 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SNX16P57768 344 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 CXCR4P61073 352 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 GBX1Q14549 363 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 NAPEPLDQ6IQ20 393 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TRAF7Q6Q0C0 670 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 MID1IP1Q9NPA3 183 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TRMT13Q9NUP7 481 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 PRMT7Q9NVM4 692 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SMPD4Q9NXE4 827 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC2A6Q9UGQ3 507 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TRHDEQ9UKU6 1024 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TBC1D24Q9ULP9 559 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 FADS2P1A8MWK0 482 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 GNGT2O14610 69 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ITGAMP11215 1152 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 GGT1P19440 569 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 LIPAP38571 399 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 DCTP40126 519 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 UFM1P61960 85 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 HERVK_113P63132 956 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 KANK2Q63ZY3 851 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF517Q6ZMY9 492 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ACOT1Q86TX2 421 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 KCNA7Q96RP8 456 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ERVK-6Q9BXR3 956 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 NARFLQ9H6Q4 476 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ALG9Q9H6U8 611 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 UTS2RQ9UKP6 389 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 BTRCQ9Y297 605 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 PLXNA1Q9UIW2 1896 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 HCRTO43612 131 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TRAPPC2P0DI81 140 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 TRAPPC2BP0DI82 140 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 CTRB1P17538 263 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 DNAJB2P25686 324 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ETV6P41212 452 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 AP2S1P53680 142 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SYT16Q17RD7 645 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM214AQ32MH5 1076 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 KIAA0319Q5VV43 1072 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 CTRB2Q6GPI1 263 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 NECAB2Q7Z6G3 386 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF540Q8NDQ6 660 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SETD9Q8NE22 299 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms