RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HPCAL1P37235 193 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PBX3P40426 434 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 LRP8Q14114 963 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PDE12Q6L8Q7 609 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SCML4Q8N228 414 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 MINDY1Q8N5J2 469 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 BTN2A3PQ96KV6 586 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 A8MV72 311 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLSCR1O15162 318 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SNX4O95219 450 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GRK4P32298 578 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ATP5C1P36542 298 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CASP9P55211 416 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF284Q2VY69 593 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SPANXN4Q5MJ08 99 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CARM1Q86X55 608 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC7A5P1Q8MH63 180 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GTPBP3Q969Y2 492 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 C1orf109Q9NX04 203 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 COL1A2P08123 1366 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 KRBA1A5PL33 1030 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR10H3O60404 316 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLOD3O60568 738 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GABBR2O75899 941 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ENO2P09104 434 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ATP4BP51164 291 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARPC4P59998 168 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CYP4F8P98187 520 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TAF10Q12962 218 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TMPRSS11AQ6ZMR5 421 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TMEM159Q96B96 161 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 DIRAS2Q96HU8 199 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 MARCH4Q9P2E8 410 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ERVK-18Q9QC07 812 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SMIM35A0A1B0GVV1 85 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 HTR3EA5X5Y0 456 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CNTN5O94779 1100 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 IL6P05231 212 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GTF2E2P29084 291 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CD52P31358 61 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 HOXD12P35452 270 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GSTM5P46439 218 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 CDH12P55289 794 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF404Q494X3 552 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 C6orf136Q5SQH8 315 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF544Q6NX49 715 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 MZT2BQ6NZ67 158 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SH2D5Q6ZV89 423 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 KCTD13Q8WZ19 329 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 GSTK1Q9Y2Q3 226 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 DYRK1BQ9Y463 629 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 A0A1W2PQ67 120 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZW10O43264 779 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 DFNA5O60443 496 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 AP2A2O94973 939 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 GDF5P43026 501 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLA2G16P53816 162 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 CDKN2DP55273 166 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPS14P62263 151 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 LCN8Q6JVE9 175 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 DDX53Q86TM3 631 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 NCSTNQ92542 709 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 RNF38Q9H0F5 515 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 ATG10Q9H0Y0 220 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 SERHL2Q9H4I8 314 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 SERHLQ9NQF3 203 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 TMEM181Q9P2C4 612 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 MRPS7Q9Y2R9 242 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 PPP6CO00743 305 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 COX10Q12887 443 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 HSF5Q4G112 596 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 RBFAQ8N0V3 343 aa12.93□□□□□ -0.34
TRAPPC9-201ENST00000389328 EEF1AKMT1Q8WVE0 214 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms