RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 TFAP2BQ92481 460 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 TMBIM1Q969X1 311 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 CDADC1Q9BWV3 514 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 OXSMQ9NWU1 459 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 DERAQ9Y315 318 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 PRPS2P11908 318 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 PTPN9P43378 593 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 CBX5P45973 191 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 ZNF234Q14588 700 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 LARS2Q15031 903 aaKnown RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 C6orf89Q6UWU4 347 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 EGFL6Q8IUX8 553 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 OR10H4Q8NGA5 316 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 PCDH19Q8TAB3 1148 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 AIF1LQ9BQI0 150 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 ITPAQ9BY32 194 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 RSL1D1O76021 490 aaKnown RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 AMD1P17707 334 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 BRCC3P46736 316 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 TEAD4Q15561 434 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 DNASE1L2Q92874 299 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 FATE1Q969F0 183 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 KCNC2Q96PR1 638 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 MGME1Q9BQP7 344 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 SLC39A3Q9BRY0 314 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
FANCA-202ENST00000389301 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
FANCA-202ENST00000389301 TCAF2A6NFQ2 919 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 KERAO60938 352 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 XYLBO75191 536 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 CTSEP14091 401 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 EEFSECP57772 596 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 TXNL4AP83876 142 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 KLHL22Q53GT1 634 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 NAT16Q8N8M0 369 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 OR10H5Q8NGA6 315 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 SLC9A6Q92581 669 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 LRRC58Q96CX6 371 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 FKBP7Q9Y680 259 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 JCADQ9P266 1359 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ISPDA4D126 451 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 PQBP1O60828 265 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 C22orf31O95567 290 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ELFN1P0C7U0 828 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 LAMP2P13473 410 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 SLC6A4P31645 630 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 FEM1CQ96JP0 617 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ZC3H10Q96K80 434 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 BTN2A3PQ96KV6 586 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 C1orf109Q9NX04 203 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 MATN3O15232 486 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 GSTT2BP0CG30 244 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 SLC15A1P46059 708 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 FKBP1AP62942 108 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 CHIT1Q13231 466 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 GANABQ14697 944 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 SMARCD3Q6STE5 483 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 NCCRP1Q6ZVX7 275 aaPredicted RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 PARGQ86W56 976 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 CPNE9Q8IYJ1 553 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 GLB1L3Q8NCI6 653 aaPredicted RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 FAM129BQ96TA1 746 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 C1orf21Q9H246 121 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 SNX10Q9Y5X0 201 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 NEMP2A6NFY4 417 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 CLPXO76031 633 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 IL1BP01584 269 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ITPKBP27987 946 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 DNASE1L1P49184 302 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 AP1S2P56377 157 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 HSPB3Q12988 150 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 UBAP2Q5T6F2 1119 aaKnown RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 TMEM110Q86TL2 294 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 CADM2Q8N3J6 435 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 RGS17Q9UGC6 210 aaPredicted RBP12.33□□□□□ -0.44
FANCA-202ENST00000389301 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
FANCA-202ENST00000389301 A0A1W2PPW3 197 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 M0QX08 132 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 CHP2O43745 196 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 APOC1P02654 83 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 SPAM1P38567 509 aa12.32□□□□□ -0.44
FANCA-202ENST00000389301 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■□□□□ 10.5
FANCA-202ENST00000389301 CAMK1Q14012 370 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms