RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 DDX5P17844 614 aaKnown RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 LGALS3P17931 250 aaKnown RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 CELP19835 753 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 MCCP23508 829 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 AKAP5P24588 427 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 GRK5P34947 590 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 DDIT3P35638 169 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PTPN9P43378 593 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 MAP2K4P45985 399 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SUOXP51687 545 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 LBX1P52954 281 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 RBPJQ06330 500 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 UNC119Q13432 240 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PTPROQ16827 1216 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 KRT24Q2M2I5 525 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 AP5B1Q2VPB7 878 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PLEKHG6Q3KR16 790 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SPIN3Q5JUX0 258 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PRR9Q5T870 116 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 Q6ZSA8 131 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 TMTC3Q6ZXV5 915 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 LRRC8DQ7L1W4 858 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 CHMP1BQ7LBR1 199 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 RNF144BQ7Z419 303 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ABHD12BQ7Z5M8 362 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 AMIGO1Q86WK6 493 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 MIER2Q8N344 545 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 MAPKAPK5-AS1Q8N8E1 139 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ZNF383Q8NA42 475 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SYT14Q8NB59 555 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 CSNK1G2-AS1Q8NCQ2 148 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 MYRIPQ8NFW9 859 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 OR2AK2Q8NG84 335 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PLBD2Q8NHP8 589 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 C11orf45Q8TAV5 145 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ZNF564Q8TBZ8 553 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SETD7Q8WTS6 366 aaKnown RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SLC22A17Q8WUG5 538 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SLC38A5Q8WUX1 472 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SREK1Q8WXA9 508 aaKnown RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 DYRK2Q92630 601 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ATXN7L3BQ96GX2 97 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 IMMP1LQ96LU5 166 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SHARPINQ9H0F6 387 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 JPT2Q9H910 190 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 TRPC7Q9HCX4 862 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PLAC8Q9NZF1 115 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 TMOD4Q9NZQ9 345 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ITGB1BP2Q9UKP3 347 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 ATP8A1Q9Y2Q0 1164 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 COPG1Q9Y678 874 aaKnown RBP-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 TNS2Q63HR2 1409 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 FMN1Q68DA7 1419 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 PKHD1L1Q86WI1 4243 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 SEC16AO15027 2179 aa-0.91□□□□□ -2.56
RNU6-540P-201ENST00000384622 APOBP04114 4563 aaKnown RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ANK3Q12955 4377 aaKnown RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 DNAH5Q8TE73 4624 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 FRYQ5TBA9 3013 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 IGLV9-49A0A0B4J1Y8 123 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 IGKV1-6A0A0C4DH72 117 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 A8MV72 311 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 SLC25A17O43808 307 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 COQ9O75208 318 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 RBBP9O75884 186 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 MTA2O94776 668 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 CCNDBP1O95273 360 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 CD58P19256 250 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ATICP31939 592 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ID1P41134 155 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 OS9Q13438 667 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 SERINC3Q13530 473 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ARHGEF6Q15052 776 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 MS4A18Q3C1V0 323 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 SYCP2LQ5T4T6 812 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 LYSMD4Q5XG99 296 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 PGBD2Q6P3X8 592 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 KCTD18Q6PI47 426 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 Q71RC1 249 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 CHST15Q7LFX5 561 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 C5orf24Q7Z6I8 188 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ZFAND4Q86XD8 727 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 HIPK1Q86Z02 1210 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 SBSPONQ8IVN8 264 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 PRR18Q8N4B5 295 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 NGEFQ8N5V2 710 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 ENDOVQ8N8Q3 282 aaKnown RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 GOLGA6L2Q8N9W4 650 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 RDM1Q8NG50 284 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 NSMAFQ92636 917 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 C18orf8Q96DM3 657 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 RRNAD1Q96FB5 475 aaKnown RBP-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 RNF5Q99942 180 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 HDHD5Q9BXW7 423 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 PITPNM3Q9BZ71 974 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 TRIM31Q9BZY9 425 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 SACM1LQ9NTJ5 587 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 EXD2Q9NVH0 621 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 GRHL1Q9NZI5 618 aa-0.92□□□□□ -2.56
RNU6-540P-201ENST00000384622 STOX2Q9P2F5 926 aaPredicted RBP-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms